当前解析结果
SmilChr05G003025| 统一新 Gene ID | SmilChr05G003025 |
|---|---|
| 名称 | SmilChr05G003025 |
| 描述 | uncharacterized SmilChr05G003025 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 37813029 - 37816854 / + |
| NCBI Gene ID | LOC131024314 |
|---|---|
| GeneID | 131024314 |
| locus_tag | - |
| NCBI Name | LOC131024314 |
| 原始查询 | LOC131024314 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:820354]; symbol=AT3G11810; hit=AT3G11810; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:820354]; symbol=AT3G11810; hit=AT3G11810; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G11810 (AT3G11810)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:820354] identity=40.4; qcov=0.571; evalue=5.42e-26; confidence=medium |
| Rice | Os12g0257500- identity=42.4; qcov=0.496; evalue=2.76e-16; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024314 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057809803.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057809804.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057809803.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057809803.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057809803.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:37815399 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A21,B28,C87,D5 |
Chr5:37815705 |
AG |
A |
1bp_deletion | frameshift_variant | 1 | C42 |
Chr5:37815705 |
AG |
A |
1bp_deletion | CDS_variant | 1 | C42 |
Chr5:37815706 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A14,A5,B57,C36,C46 |
Chr5:37815739 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A19,B86,C82 |
Chr5:37815745 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr5:37815765 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C36 |
Chr5:37815809 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C30,D6 |
Chr5:37815824 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A9,B121,B16,C34,C40 |
Chr5:37815884 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B123,B128,C82 |
Chr5:37815886 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A21,C87 |
Chr5:37815939 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B135 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。