当前解析结果
SmilChr01G001257| 统一新 Gene ID | SmilChr01G001257 |
|---|---|
| 名称 | SmilChr01G001257 |
| 描述 | uncharacterized SmilChr01G001257 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 25230481 - 25233494 / - |
| NCBI Gene ID | LOC131024349 |
|---|---|
| GeneID | 131024349 |
| locus_tag | - |
| NCBI Name | LOC131024349 |
| 原始查询 | LOC131024349 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Phospholipase A2 family protein [Source:NCBI gene (formerly Entrezgene);Acc:829028]; symbol=AT4G29070; hit=AT4G29070; species=arabidopsis; confidence=high |
| 产物 | Phospholipase A2 family protein [Source:NCBI gene (formerly Entrezgene);Acc:829028]; symbol=AT4G29070; hit=AT4G29070; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G29070 (AT4G29070)Phospholipase A2 family protein [Source:NCBI gene (formerly Entrezgene);Acc:829028] identity=51.8; qcov=1.07; evalue=9.36e-88; confidence=high |
| Rice | Os07g0658000 (OJ1477_F01.108)- identity=54.3; qcov=0.148; evalue=1.41e-06; confidence=weak |
| GO | GO:0004623 (A2-type glycerophospholipase activity); GO:0006644 (phospholipid metabolic process); GO:0050482 (arachidonate secretion) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024349 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 0.80000 | XP_057809842.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 0.40000 | XP_057809842.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057809842.1 |
| 4 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057809842.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057809842.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:25230672 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B139,B32,B76,C37 |
Chr1:25230993 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B30 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。