Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G003327`

染色体: Chr05 坐标: 43629717-43633363 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G003327`
名称	SmilChr05G003327
描述	uncharacterized protein At5g41620-like
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	43629717 - 43633363 / `+`

ID 对照

NCBI Gene ID	`LOC131024675`
GeneID	`131024675`
locus_tag	`-`
NCBI Name	`LOC131024675`
原始查询	`LOC131024675`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	intracellular protein transporter USO1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834164]; symbol=AT5G41620; hit=AT5G41620; species=arabidopsis; confidence=medium
产物	intracellular protein transporter USO1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834164]; symbol=AT5G41620; hit=AT5G41620; species=arabidopsis; confidence=medium
Arabidopsis	`AT5G41620` (AT5G41620) intracellular protein transporter USO1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834164] identity=37.1; qcov=0.99; evalue=1.4e-77; confidence=medium
Rice	`Os02g0260500` (SIP7) - identity=38.4; qcov=0.571; evalue=1.07e-46; confidence=medium
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131024675

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057810170.1`
2	Cytoskeleton	细胞骨架	0.80000	`XP_057810171.1`
3	Nucleus	细胞核	0.20000	`XP_057810170.1`
4	Cytosol	细胞质基质	0.20000	`XP_057810170.1`
5	Chromosome	染色体	0.00000	`XP_057810170.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:43630127`	`ATG`	`A`	2bp_deletion	frameshift_variant	1	B140
`Chr5:43630127`	`ATG`	`A`	2bp_deletion	CDS_variant	1	B140
`Chr5:43630355`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr5:43630356`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B31
`Chr5:43631779`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B100
`Chr5:43632030`	`GTC`	`G`	2bp_deletion	frameshift_variant	3	B121,C4,C8
`Chr5:43632030`	`GTC`	`G`	2bp_deletion	CDS_variant	3	B121,C4,C8
`Chr5:43632202`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B38,B39
`Chr5:43632304`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B122
`Chr5:43632354`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B33,C75
`Chr5:43632474`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B29,B73,B97,D8
`Chr5:43632614`	`A`	`ATG`	2bp_insertion	frameshift_variant	81	A13,A15,A16,A19,A21,A6,A9,B1,B10,B100,B101,B102,B112,B113,B115,B117,B119,B121,B124,B131,B135,B139,B140,B26,B27,B3,B30,B32,B38,B39,B40,B46,B5,B53,B54,B57,B59,B61,B66,B7,B72,B74,B76,B77,B78,B8,B83,B84,B87,B89,B90,B92,B95,C11,C19,C2,C20,C21,C22,C24,C26,C30,C36,C4,C45,C47,C48,C50,C51,C55,C57,C64,C66,C69,C7,C70,C76,C77,C79,C87,D5

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057954187.1
CATGTATAGTTAATTCAGTATATATTTAATAAGTGTTTGTGTGTGTGTGGGTTTTTTTTTTTTTTTTTTGAATTGCTATGATTTGTGAATTGAACATATGCATTACCTACATTCATTTATATATATAACTGCAAACTTGTATGTATTGCATTTTGCAACATGTGTGTGGGTGTGGCACATACAAAATGAAGCTAAAAAAAGTGAGAGTAGAGGAGGGGCATTAAGCACATGAATATGCAGTAGTTGGAATAAACTCAAAA...

XM_057954188.1
AATGAAGCTAAAAAAAGTGAGAGTAGAGGAGGGGCATTAAGCACATGAATATGCAGTAGTTGGAATAAACTCAAAATGTCGCAGCTATCAATGACCGGTGCAGAGGAGAAAATGATTGAATCATGTGCTCCTATTTTAATTCACCCAACAACTACAAATAAACCTCACATTTCATACCTTTATAACTCCATGCAACCATCTTTCAAGTCTAGAGAGAGAGAGAGAGATGGAAAGGGGCGAGGAAAGTGGGGAAGAAAAGG...

CDS

2 records

下载 CDS FASTA

LOC131024675
ATGGAAAGGGGCGAGGAAAGTGGGGAAGAAAAGGCAGAATTTCTGTGGGAGAAGTTGAGGAATGTAGGAAAGAGAGGGCATTCGACTCCTGCAGCTTCATTTTGGAGAAGGAAGGAATTGCACGACACTTTGGGGATAATTTCATCGAGAAAACTTGCCGCTGCTTTCTGGGAGCTCCATCAATACAAGCCACTCACTAACATGCGCCGCCGCCTCACTGCCCCTCCGCCGCCTACTCTGCCTGAAAGTTGGAGTAATTC...

Protein

2 records

下载 Protein FASTA

XP_057810170.1
MERGEESGEEKAEFLWEKLRNVGKRGHSTPAASFWRRKELHDTLGIISSRKLAAAFWELHQYKPLTNMRRRLTAPPPPTLPESWSNSRRRVADLLRQHHRSIETSSHATQTVSPSSCSSSMEIALCNPATSPSSIELKGRNGELTYSFRTSTEVLRVLNRVWSLEEQHVSNMSLIKALKKELGRARFHAKELVRDQQGGRHEMVELMKNITGGGGKPVRKSKAKVESTRDDELEHERKLRKQSETLQRKLAQELYEVKRS...

XP_057810171.1
MERGEESGEEKAEFLWEKLRNVGKRGHSTPAASFWRRKELHDTLGIISSRKLAAAFWELHQYKPLTNMRRRLTAPPPPTLPESWSNSRRRVADLLRQHHRSIETSSHATQTVSPSSCSSSMEIALCNPATSPSSIELKGRNGELTYSFRTSTEVLRVLNRVWSLEEQHVSNMSLIKALKKELGRARFHAKELVRDQQGGRHEMVELMKNITGGGGKPVRKSKAKVESTRDDELEHERKLRKQSETLQRKLAQELYEVKRS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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