当前解析结果
SmilChr05G000328| 统一新 Gene ID | SmilChr05G000328 |
|---|---|
| 名称 | SmilChr05G000328 |
| 描述 | uncharacterized SmilChr05G000328 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 2445796 - 2446990 / + |
| NCBI Gene ID | LOC131024774 |
|---|---|
| GeneID | 131024774 |
| locus_tag | - |
| NCBI Name | LOC131024774 |
| 原始查询 | LOC131024774 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | alpha-crystallin domain 32.1 [Source:NCBI gene (formerly Entrezgene);Acc:837158]; symbol=ACD32.1; hit=AT1G06460; species=arabidopsis; confidence=low |
| 产物 | alpha-crystallin domain 32.1 [Source:NCBI gene (formerly Entrezgene);Acc:837158]; symbol=ACD32.1; hit=AT1G06460; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G06460 (ACD32.1)alpha-crystallin domain 32.1 [Source:NCBI gene (formerly Entrezgene);Acc:837158] identity=37; qcov=0.608; evalue=2.07e-06; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024774 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057810296.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057810296.1 |
| 3 | Nucleoplasm | 核质 | 0.40000 | XP_057810296.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057810296.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057810296.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:2446596 |
TCC |
T |
2bp_deletion | frameshift_variant | 9 | A14,A3,A8,B115,B127,B53,B60,C24,C72 |
Chr5:2446605 |
C |
CGG |
2bp_insertion | frameshift_variant | 65 | A11,A16,A25,A4,A7,B105,B107,B108,B11,B110,B114,B123,B124,B126,B13,B132,B138,B15,B16,B23,B36,B46,B47,B53,B59,B6,B62,B68,B69,B70,B73,B74,B75,B8,B82,B89,B93,B94,B98,C1,C11,C15,C22,C27,C28,C3,C34,C38,C41,C45,C50,C51,C59,C6,C63,C64,C66,C67,C69,C72,C75,C81,C83,D3,D6 |
Chr5:2446662 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B58 |
Chr5:2446662 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B58 |
Chr5:2446758 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C4 |
Chr5:2446767 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A16,A25,B94,C11,C69 |
Chr5:2446781 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B13,B68 |
Chr5:2446791 |
TC |
T |
1bp_deletion | frameshift_variant | 4 | B12,B5,B55,C6 |
Chr5:2446791 |
TC |
T |
1bp_deletion | CDS_variant | 4 | B12,B5,B55,C6 |
Chr5:2446885 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B19,B32,B33,C8 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。