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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr05G003789

染色体: Chr05 坐标: 51227943-51234484 链方向: - 类型: protein_coding

基本信息

统一新 Gene IDSmilChr05G003789
名称SmilChr05G003789
描述pentatricopeptide repeat-containing protein At5g24830
染色体 / SeqIDChr05 / NC_080391.1
坐标与链方向51227943 - 51234484 / -

ID 对照

NCBI Gene IDLOC131024851
GeneID131024851
locus_tag-
NCBI NameLOC131024851
原始查询LOC131024851

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At5g24830
产物pentatricopeptide repeat-containing protein At5g24830
ArabidopsisAT5G24830 (AT5G24830)
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:832552]
identity=43.7; qcov=0.82; evalue=2.79e-157; confidence=medium
RiceOs06g0152500
-
identity=30.9; qcov=0.617; evalue=1.36e-65; confidence=low
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:131024851

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 1.00000 XP_057810367.1
2 Mitochondrion membrane 线粒体膜 0.20000 XP_057810367.1
3 Mitochondrion inner membrane 线粒体内膜 0.20000 XP_057810367.1
4 Nucleus 细胞核 0.00000 XP_057810367.1
5 Chromosome 染色体 0.00000 XP_057810367.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr5:51230081 C T EMS_canonical_SNV CDS_variant 1 B140
Chr5:51230083 G A EMS_canonical_SNV CDS_variant 4 B5,C52,C59,C71
Chr5:51230088 CT C 1bp_deletion frameshift_variant 41 A1,A13,A18,A20,A21,A3,B114,B119,B126,B140,B16,B25,B35,B49,B5,B6,B62,B81,B84,B87,B93,C1,C14,C20,C24,C29,C3,C42,C43,C44,C52,C56,C59,C67,C70,C71,C72,C83,C86,D1,D2
Chr5:51230106 A ACG 2bp_insertion frameshift_variant 10 A13,A23,B105,B114,B25,B44,B62,B84,C70,D7
Chr5:51230108 GCA G 2bp_deletion frameshift_variant 10 A13,A23,B105,B114,B25,B44,B62,B84,C70,D7
Chr5:51230222 C T EMS_canonical_SNV CDS_variant 4 A5,B90,B92,C9
Chr5:51230250 AT A 1bp_deletion frameshift_variant 1 B99
Chr5:51230250 AT A 1bp_deletion CDS_variant 1 B99
Chr5:51230252 G A EMS_canonical_SNV CDS_variant 1 B99
Chr5:51230255 G A EMS_canonical_SNV CDS_variant 3 C29,C72,D2
Chr5:51230416 G A EMS_canonical_SNV CDS_variant 5 A15,B28,C12,C3,C8
Chr5:51230455 C T EMS_canonical_SNV CDS_variant 3 B90,B92,C55

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057810367.1
720 aa
N
1
360
720
PPR_1
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
PPR_3
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
TPR_24
PPR
PPR_2
PPR_long
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
C
PF12854 PPR_1 297-325 aa PF13812 PPR_3 297-344 aa PF13041 PPR_2 297-345 aa PF01535 PPR 301-329 aa PF12854 PPR_1 329-361 aa PF13041 PPR_2 332-381 aa PF01535 PPR 336-365 aa PF12854 PPR_1 363-394 aa PF01535 PPR 370-398 aa PF01535 PPR 411-438 aa PF13812 PPR_3 432-485 aa PF13041 PPR_2 441-484 aa PF12854 PPR_1 472-503 aa PF13041 PPR_2 475-523 aa PF01535 PPR 478-508 aa PF13812 PPR_3 503-560 aa PF12854 PPR_1 506-538 aa PF23276 TPR_24 535-642 aa PF01535 PPR 549-578 aa PF13041 PPR_2 549-589 aa PF17177 PPR_long 559-709 aa PF13812 PPR_3 570-628 aa PF01535 PPR 583-612 aa PF13041 PPR_2 585-628 aa PF12854 PPR_1 611-643 aa PF13041 PPR_2 615-663 aa PF01535 PPR 618-648 aa PF13812 PPR_3 639-678 aa PF12854 PPR_1 646-678 aa PF01535 PPR 653-679 aa
XP_057810368.1
720 aa
N
1
360
720
PPR_1
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
PPR_3
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
TPR_24
PPR
PPR_2
PPR_long
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
C
PF12854 PPR_1 297-325 aa PF13812 PPR_3 297-344 aa PF13041 PPR_2 297-345 aa PF01535 PPR 301-329 aa PF12854 PPR_1 329-361 aa PF13041 PPR_2 332-381 aa PF01535 PPR 336-365 aa PF12854 PPR_1 363-394 aa PF01535 PPR 370-398 aa PF01535 PPR 411-438 aa PF13812 PPR_3 432-485 aa PF13041 PPR_2 441-484 aa PF12854 PPR_1 472-503 aa PF13041 PPR_2 475-523 aa PF01535 PPR 478-508 aa PF13812 PPR_3 503-560 aa PF12854 PPR_1 506-538 aa PF23276 TPR_24 535-642 aa PF01535 PPR 549-578 aa PF13041 PPR_2 549-589 aa PF17177 PPR_long 559-709 aa PF13812 PPR_3 570-628 aa PF01535 PPR 583-612 aa PF13041 PPR_2 585-628 aa PF12854 PPR_1 611-643 aa PF13041 PPR_2 615-663 aa PF01535 PPR 618-648 aa PF13812 PPR_3 639-678 aa PF12854 PPR_1 646-678 aa PF01535 PPR 653-679 aa
XP_057810369.1
720 aa
N
1
360
720
PPR_1
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
PPR_3
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
TPR_24
PPR
PPR_2
PPR_long
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
C
PF12854 PPR_1 297-325 aa PF13812 PPR_3 297-344 aa PF13041 PPR_2 297-345 aa PF01535 PPR 301-329 aa PF12854 PPR_1 329-361 aa PF13041 PPR_2 332-381 aa PF01535 PPR 336-365 aa PF12854 PPR_1 363-394 aa PF01535 PPR 370-398 aa PF01535 PPR 411-438 aa PF13812 PPR_3 432-485 aa PF13041 PPR_2 441-484 aa PF12854 PPR_1 472-503 aa PF13041 PPR_2 475-523 aa PF01535 PPR 478-508 aa PF13812 PPR_3 503-560 aa PF12854 PPR_1 506-538 aa PF23276 TPR_24 535-642 aa PF01535 PPR 549-578 aa PF13041 PPR_2 549-589 aa PF17177 PPR_long 559-709 aa PF13812 PPR_3 570-628 aa PF01535 PPR 583-612 aa PF13041 PPR_2 585-628 aa PF12854 PPR_1 611-643 aa PF13041 PPR_2 615-663 aa PF01535 PPR 618-648 aa PF13812 PPR_3 639-678 aa PF12854 PPR_1 646-678 aa PF01535 PPR 653-679 aa
XP_057810370.1
720 aa
N
1
360
720
PPR_1
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
PPR_3
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
TPR_24
PPR
PPR_2
PPR_long
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
C
PF12854 PPR_1 297-325 aa PF13812 PPR_3 297-344 aa PF13041 PPR_2 297-345 aa PF01535 PPR 301-329 aa PF12854 PPR_1 329-361 aa PF13041 PPR_2 332-381 aa PF01535 PPR 336-365 aa PF12854 PPR_1 363-394 aa PF01535 PPR 370-398 aa PF01535 PPR 411-438 aa PF13812 PPR_3 432-485 aa PF13041 PPR_2 441-484 aa PF12854 PPR_1 472-503 aa PF13041 PPR_2 475-523 aa PF01535 PPR 478-508 aa PF13812 PPR_3 503-560 aa PF12854 PPR_1 506-538 aa PF23276 TPR_24 535-642 aa PF01535 PPR 549-578 aa PF13041 PPR_2 549-589 aa PF17177 PPR_long 559-709 aa PF13812 PPR_3 570-628 aa PF01535 PPR 583-612 aa PF13041 PPR_2 585-628 aa PF12854 PPR_1 611-643 aa PF13041 PPR_2 615-663 aa PF01535 PPR 618-648 aa PF13812 PPR_3 639-678 aa PF12854 PPR_1 646-678 aa PF01535 PPR 653-679 aa
XP_057810371.1
720 aa
N
1
360
720
PPR_1
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
PPR_3
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
TPR_24
PPR
PPR_2
PPR_long
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
C
PF12854 PPR_1 297-325 aa PF13812 PPR_3 297-344 aa PF13041 PPR_2 297-345 aa PF01535 PPR 301-329 aa PF12854 PPR_1 329-361 aa PF13041 PPR_2 332-381 aa PF01535 PPR 336-365 aa PF12854 PPR_1 363-394 aa PF01535 PPR 370-398 aa PF01535 PPR 411-438 aa PF13812 PPR_3 432-485 aa PF13041 PPR_2 441-484 aa PF12854 PPR_1 472-503 aa PF13041 PPR_2 475-523 aa PF01535 PPR 478-508 aa PF13812 PPR_3 503-560 aa PF12854 PPR_1 506-538 aa PF23276 TPR_24 535-642 aa PF01535 PPR 549-578 aa PF13041 PPR_2 549-589 aa PF17177 PPR_long 559-709 aa PF13812 PPR_3 570-628 aa PF01535 PPR 583-612 aa PF13041 PPR_2 585-628 aa PF12854 PPR_1 611-643 aa PF13041 PPR_2 615-663 aa PF01535 PPR 618-648 aa PF13812 PPR_3 639-678 aa PF12854 PPR_1 646-678 aa PF01535 PPR 653-679 aa
XP_057810372.1
713 aa
N
1
356
713
PPR_1
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
PPR_3
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
TPR_24
PPR
PPR_2
PPR_long
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR
C
PF12854 PPR_1 290-318 aa PF13812 PPR_3 290-337 aa PF13041 PPR_2 290-338 aa PF01535 PPR 294-322 aa PF12854 PPR_1 322-354 aa PF13041 PPR_2 325-374 aa PF01535 PPR 329-358 aa PF12854 PPR_1 356-387 aa PF01535 PPR 363-391 aa PF01535 PPR 404-431 aa PF13812 PPR_3 425-478 aa PF13041 PPR_2 434-477 aa PF12854 PPR_1 465-496 aa PF13041 PPR_2 468-516 aa PF01535 PPR 471-501 aa PF13812 PPR_3 496-553 aa PF12854 PPR_1 499-531 aa PF23276 TPR_24 528-635 aa PF01535 PPR 542-571 aa PF13041 PPR_2 542-582 aa PF17177 PPR_long 552-702 aa PF13812 PPR_3 563-621 aa PF01535 PPR 576-605 aa PF13041 PPR_2 578-621 aa PF12854 PPR_1 604-636 aa PF13041 PPR_2 608-656 aa PF01535 PPR 611-641 aa PF13812 PPR_3 632-671 aa PF12854 PPR_1 639-671 aa PF01535 PPR 646-672 aa
XP_057810374.1
687 aa
N
1
344
687
PPR_1
PPR_3
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR
PPR_3
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
TPR_24
PPR
PPR_2
PPR_long
PPR_3
PPR
PPR_2
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
C
PF12854 PPR_1 264-292 aa PF13812 PPR_3 264-311 aa PF13041 PPR_2 264-312 aa PF01535 PPR 268-296 aa PF12854 PPR_1 296-328 aa PF13041 PPR_2 299-348 aa PF01535 PPR 303-332 aa PF12854 PPR_1 330-361 aa PF01535 PPR 337-365 aa PF01535 PPR 378-405 aa PF13812 PPR_3 399-452 aa PF13041 PPR_2 408-456 aa PF12854 PPR_1 439-470 aa PF13041 PPR_2 442-490 aa PF01535 PPR 445-475 aa PF13812 PPR_3 470-527 aa PF12854 PPR_1 473-505 aa PF23276 TPR_24 502-609 aa PF01535 PPR 516-545 aa PF13041 PPR_2 516-556 aa PF17177 PPR_long 526-676 aa PF13812 PPR_3 537-595 aa PF01535 PPR 550-579 aa PF13041 PPR_2 552-595 aa PF12854 PPR_1 578-610 aa PF13041 PPR_2 582-630 aa PF01535 PPR 585-615 aa PF13812 PPR_3 606-645 aa PF12854 PPR_1 613-645 aa PF13041 PPR_2 617-666 aa PF01535 PPR 620-646 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057810367.1 Pfam PF12854 PPR_1 Repeat 297 325 3.3e-85 280.2 PPR repeat
XP_057810367.1 Pfam PF13812 PPR_3 Repeat 297 344 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810367.1 Pfam PF13041 PPR_2 Repeat 297 345 6.2e-98 321.5 PPR repeat family
XP_057810367.1 Pfam PF01535 PPR Repeat 301 329 2.1e-62 203.8 PPR repeat
XP_057810367.1 Pfam PF12854 PPR_1 Repeat 329 361 3.3e-85 280.2 PPR repeat
XP_057810367.1 Pfam PF13041 PPR_2 Repeat 332 381 6.2e-98 321.5 PPR repeat family
XP_057810367.1 Pfam PF01535 PPR Repeat 336 365 2.1e-62 203.8 PPR repeat
XP_057810367.1 Pfam PF12854 PPR_1 Repeat 363 394 3.3e-85 280.2 PPR repeat
XP_057810367.1 Pfam PF01535 PPR Repeat 370 398 2.1e-62 203.8 PPR repeat
XP_057810367.1 Pfam PF01535 PPR Repeat 411 438 2.1e-62 203.8 PPR repeat
XP_057810367.1 Pfam PF13812 PPR_3 Repeat 432 485 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810367.1 Pfam PF13041 PPR_2 Repeat 441 484 6.2e-98 321.5 PPR repeat family
XP_057810367.1 Pfam PF12854 PPR_1 Repeat 472 503 3.3e-85 280.2 PPR repeat
XP_057810367.1 Pfam PF13041 PPR_2 Repeat 475 523 6.2e-98 321.5 PPR repeat family
XP_057810367.1 Pfam PF01535 PPR Repeat 478 508 2.1e-62 203.8 PPR repeat
XP_057810367.1 Pfam PF13812 PPR_3 Repeat 503 560 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810367.1 Pfam PF12854 PPR_1 Repeat 506 538 3.3e-85 280.2 PPR repeat
XP_057810367.1 Pfam PF23276 TPR_24 Repeat 535 642 1.6e-20 74.1 Pentatricopeptide repeat-containing protein
XP_057810367.1 Pfam PF01535 PPR Repeat 549 578 2.1e-62 203.8 PPR repeat
XP_057810367.1 Pfam PF13041 PPR_2 Repeat 549 589 6.2e-98 321.5 PPR repeat family
XP_057810367.1 Pfam PF17177 PPR_long Repeat 559 709 9.8e-23 81.4 Pentacotripeptide-repeat region of PRORP
XP_057810367.1 Pfam PF13812 PPR_3 Repeat 570 628 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810367.1 Pfam PF01535 PPR Repeat 583 612 2.1e-62 203.8 PPR repeat
XP_057810367.1 Pfam PF13041 PPR_2 Repeat 585 628 6.2e-98 321.5 PPR repeat family
XP_057810367.1 Pfam PF12854 PPR_1 Repeat 611 643 3.3e-85 280.2 PPR repeat
XP_057810367.1 Pfam PF13041 PPR_2 Repeat 615 663 6.2e-98 321.5 PPR repeat family
XP_057810367.1 Pfam PF01535 PPR Repeat 618 648 2.1e-62 203.8 PPR repeat
XP_057810367.1 Pfam PF13812 PPR_3 Repeat 639 678 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810367.1 Pfam PF12854 PPR_1 Repeat 646 678 3.3e-85 280.2 PPR repeat
XP_057810367.1 Pfam PF01535 PPR Repeat 653 679 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF12854 PPR_1 Repeat 297 325 3.3e-85 280.2 PPR repeat
XP_057810368.1 Pfam PF13812 PPR_3 Repeat 297 344 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810368.1 Pfam PF13041 PPR_2 Repeat 297 345 6.2e-98 321.5 PPR repeat family
XP_057810368.1 Pfam PF01535 PPR Repeat 301 329 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF12854 PPR_1 Repeat 329 361 3.3e-85 280.2 PPR repeat
XP_057810368.1 Pfam PF13041 PPR_2 Repeat 332 381 6.2e-98 321.5 PPR repeat family
XP_057810368.1 Pfam PF01535 PPR Repeat 336 365 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF12854 PPR_1 Repeat 363 394 3.3e-85 280.2 PPR repeat
XP_057810368.1 Pfam PF01535 PPR Repeat 370 398 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF01535 PPR Repeat 411 438 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF13812 PPR_3 Repeat 432 485 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810368.1 Pfam PF13041 PPR_2 Repeat 441 484 6.2e-98 321.5 PPR repeat family
XP_057810368.1 Pfam PF12854 PPR_1 Repeat 472 503 3.3e-85 280.2 PPR repeat
XP_057810368.1 Pfam PF13041 PPR_2 Repeat 475 523 6.2e-98 321.5 PPR repeat family
XP_057810368.1 Pfam PF01535 PPR Repeat 478 508 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF13812 PPR_3 Repeat 503 560 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810368.1 Pfam PF12854 PPR_1 Repeat 506 538 3.3e-85 280.2 PPR repeat
XP_057810368.1 Pfam PF23276 TPR_24 Repeat 535 642 1.6e-20 74.1 Pentatricopeptide repeat-containing protein
XP_057810368.1 Pfam PF01535 PPR Repeat 549 578 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF13041 PPR_2 Repeat 549 589 6.2e-98 321.5 PPR repeat family
XP_057810368.1 Pfam PF17177 PPR_long Repeat 559 709 9.8e-23 81.4 Pentacotripeptide-repeat region of PRORP
XP_057810368.1 Pfam PF13812 PPR_3 Repeat 570 628 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810368.1 Pfam PF01535 PPR Repeat 583 612 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF13041 PPR_2 Repeat 585 628 6.2e-98 321.5 PPR repeat family
XP_057810368.1 Pfam PF12854 PPR_1 Repeat 611 643 3.3e-85 280.2 PPR repeat
XP_057810368.1 Pfam PF13041 PPR_2 Repeat 615 663 6.2e-98 321.5 PPR repeat family
XP_057810368.1 Pfam PF01535 PPR Repeat 618 648 2.1e-62 203.8 PPR repeat
XP_057810368.1 Pfam PF13812 PPR_3 Repeat 639 678 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810368.1 Pfam PF12854 PPR_1 Repeat 646 678 3.3e-85 280.2 PPR repeat
XP_057810368.1 Pfam PF01535 PPR Repeat 653 679 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF12854 PPR_1 Repeat 297 325 3.3e-85 280.2 PPR repeat
XP_057810369.1 Pfam PF13812 PPR_3 Repeat 297 344 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810369.1 Pfam PF13041 PPR_2 Repeat 297 345 6.2e-98 321.5 PPR repeat family
XP_057810369.1 Pfam PF01535 PPR Repeat 301 329 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF12854 PPR_1 Repeat 329 361 3.3e-85 280.2 PPR repeat
XP_057810369.1 Pfam PF13041 PPR_2 Repeat 332 381 6.2e-98 321.5 PPR repeat family
XP_057810369.1 Pfam PF01535 PPR Repeat 336 365 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF12854 PPR_1 Repeat 363 394 3.3e-85 280.2 PPR repeat
XP_057810369.1 Pfam PF01535 PPR Repeat 370 398 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF01535 PPR Repeat 411 438 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF13812 PPR_3 Repeat 432 485 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810369.1 Pfam PF13041 PPR_2 Repeat 441 484 6.2e-98 321.5 PPR repeat family
XP_057810369.1 Pfam PF12854 PPR_1 Repeat 472 503 3.3e-85 280.2 PPR repeat
XP_057810369.1 Pfam PF13041 PPR_2 Repeat 475 523 6.2e-98 321.5 PPR repeat family
XP_057810369.1 Pfam PF01535 PPR Repeat 478 508 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF13812 PPR_3 Repeat 503 560 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810369.1 Pfam PF12854 PPR_1 Repeat 506 538 3.3e-85 280.2 PPR repeat
XP_057810369.1 Pfam PF23276 TPR_24 Repeat 535 642 1.6e-20 74.1 Pentatricopeptide repeat-containing protein
XP_057810369.1 Pfam PF01535 PPR Repeat 549 578 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF13041 PPR_2 Repeat 549 589 6.2e-98 321.5 PPR repeat family
XP_057810369.1 Pfam PF17177 PPR_long Repeat 559 709 9.8e-23 81.4 Pentacotripeptide-repeat region of PRORP
XP_057810369.1 Pfam PF13812 PPR_3 Repeat 570 628 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810369.1 Pfam PF01535 PPR Repeat 583 612 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF13041 PPR_2 Repeat 585 628 6.2e-98 321.5 PPR repeat family
XP_057810369.1 Pfam PF12854 PPR_1 Repeat 611 643 3.3e-85 280.2 PPR repeat
XP_057810369.1 Pfam PF13041 PPR_2 Repeat 615 663 6.2e-98 321.5 PPR repeat family
XP_057810369.1 Pfam PF01535 PPR Repeat 618 648 2.1e-62 203.8 PPR repeat
XP_057810369.1 Pfam PF13812 PPR_3 Repeat 639 678 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810369.1 Pfam PF12854 PPR_1 Repeat 646 678 3.3e-85 280.2 PPR repeat
XP_057810369.1 Pfam PF01535 PPR Repeat 653 679 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF12854 PPR_1 Repeat 297 325 3.3e-85 280.2 PPR repeat
XP_057810370.1 Pfam PF13812 PPR_3 Repeat 297 344 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810370.1 Pfam PF13041 PPR_2 Repeat 297 345 6.2e-98 321.5 PPR repeat family
XP_057810370.1 Pfam PF01535 PPR Repeat 301 329 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF12854 PPR_1 Repeat 329 361 3.3e-85 280.2 PPR repeat
XP_057810370.1 Pfam PF13041 PPR_2 Repeat 332 381 6.2e-98 321.5 PPR repeat family
XP_057810370.1 Pfam PF01535 PPR Repeat 336 365 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF12854 PPR_1 Repeat 363 394 3.3e-85 280.2 PPR repeat
XP_057810370.1 Pfam PF01535 PPR Repeat 370 398 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF01535 PPR Repeat 411 438 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF13812 PPR_3 Repeat 432 485 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810370.1 Pfam PF13041 PPR_2 Repeat 441 484 6.2e-98 321.5 PPR repeat family
XP_057810370.1 Pfam PF12854 PPR_1 Repeat 472 503 3.3e-85 280.2 PPR repeat
XP_057810370.1 Pfam PF13041 PPR_2 Repeat 475 523 6.2e-98 321.5 PPR repeat family
XP_057810370.1 Pfam PF01535 PPR Repeat 478 508 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF13812 PPR_3 Repeat 503 560 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810370.1 Pfam PF12854 PPR_1 Repeat 506 538 3.3e-85 280.2 PPR repeat
XP_057810370.1 Pfam PF23276 TPR_24 Repeat 535 642 1.6e-20 74.1 Pentatricopeptide repeat-containing protein
XP_057810370.1 Pfam PF01535 PPR Repeat 549 578 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF13041 PPR_2 Repeat 549 589 6.2e-98 321.5 PPR repeat family
XP_057810370.1 Pfam PF17177 PPR_long Repeat 559 709 9.8e-23 81.4 Pentacotripeptide-repeat region of PRORP
XP_057810370.1 Pfam PF13812 PPR_3 Repeat 570 628 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810370.1 Pfam PF01535 PPR Repeat 583 612 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF13041 PPR_2 Repeat 585 628 6.2e-98 321.5 PPR repeat family
XP_057810370.1 Pfam PF12854 PPR_1 Repeat 611 643 3.3e-85 280.2 PPR repeat
XP_057810370.1 Pfam PF13041 PPR_2 Repeat 615 663 6.2e-98 321.5 PPR repeat family
XP_057810370.1 Pfam PF01535 PPR Repeat 618 648 2.1e-62 203.8 PPR repeat
XP_057810370.1 Pfam PF13812 PPR_3 Repeat 639 678 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810370.1 Pfam PF12854 PPR_1 Repeat 646 678 3.3e-85 280.2 PPR repeat
XP_057810370.1 Pfam PF01535 PPR Repeat 653 679 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF12854 PPR_1 Repeat 297 325 3.3e-85 280.2 PPR repeat
XP_057810371.1 Pfam PF13812 PPR_3 Repeat 297 344 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810371.1 Pfam PF13041 PPR_2 Repeat 297 345 6.2e-98 321.5 PPR repeat family
XP_057810371.1 Pfam PF01535 PPR Repeat 301 329 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF12854 PPR_1 Repeat 329 361 3.3e-85 280.2 PPR repeat
XP_057810371.1 Pfam PF13041 PPR_2 Repeat 332 381 6.2e-98 321.5 PPR repeat family
XP_057810371.1 Pfam PF01535 PPR Repeat 336 365 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF12854 PPR_1 Repeat 363 394 3.3e-85 280.2 PPR repeat
XP_057810371.1 Pfam PF01535 PPR Repeat 370 398 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF01535 PPR Repeat 411 438 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF13812 PPR_3 Repeat 432 485 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810371.1 Pfam PF13041 PPR_2 Repeat 441 484 6.2e-98 321.5 PPR repeat family
XP_057810371.1 Pfam PF12854 PPR_1 Repeat 472 503 3.3e-85 280.2 PPR repeat
XP_057810371.1 Pfam PF13041 PPR_2 Repeat 475 523 6.2e-98 321.5 PPR repeat family
XP_057810371.1 Pfam PF01535 PPR Repeat 478 508 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF13812 PPR_3 Repeat 503 560 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810371.1 Pfam PF12854 PPR_1 Repeat 506 538 3.3e-85 280.2 PPR repeat
XP_057810371.1 Pfam PF23276 TPR_24 Repeat 535 642 1.6e-20 74.1 Pentatricopeptide repeat-containing protein
XP_057810371.1 Pfam PF01535 PPR Repeat 549 578 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF13041 PPR_2 Repeat 549 589 6.2e-98 321.5 PPR repeat family
XP_057810371.1 Pfam PF17177 PPR_long Repeat 559 709 9.8e-23 81.4 Pentacotripeptide-repeat region of PRORP
XP_057810371.1 Pfam PF13812 PPR_3 Repeat 570 628 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810371.1 Pfam PF01535 PPR Repeat 583 612 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF13041 PPR_2 Repeat 585 628 6.2e-98 321.5 PPR repeat family
XP_057810371.1 Pfam PF12854 PPR_1 Repeat 611 643 3.3e-85 280.2 PPR repeat
XP_057810371.1 Pfam PF13041 PPR_2 Repeat 615 663 6.2e-98 321.5 PPR repeat family
XP_057810371.1 Pfam PF01535 PPR Repeat 618 648 2.1e-62 203.8 PPR repeat
XP_057810371.1 Pfam PF13812 PPR_3 Repeat 639 678 1.5e-44 150.6 Pentatricopeptide repeat domain
XP_057810371.1 Pfam PF12854 PPR_1 Repeat 646 678 3.3e-85 280.2 PPR repeat
XP_057810371.1 Pfam PF01535 PPR Repeat 653 679 2.1e-62 203.8 PPR repeat
XP_057810372.1 Pfam PF12854 PPR_1 Repeat 290 318 2.9e-85 280.4 PPR repeat
XP_057810372.1 Pfam PF13812 PPR_3 Repeat 290 337 1.4e-44 150.7 Pentatricopeptide repeat domain
XP_057810372.1 Pfam PF13041 PPR_2 Repeat 290 338 5e-98 321.8 PPR repeat family
XP_057810372.1 Pfam PF01535 PPR Repeat 294 322 1.8e-62 204.0 PPR repeat
XP_057810372.1 Pfam PF12854 PPR_1 Repeat 322 354 2.9e-85 280.4 PPR repeat
XP_057810372.1 Pfam PF13041 PPR_2 Repeat 325 374 5e-98 321.8 PPR repeat family
XP_057810372.1 Pfam PF01535 PPR Repeat 329 358 1.8e-62 204.0 PPR repeat
XP_057810372.1 Pfam PF12854 PPR_1 Repeat 356 387 2.9e-85 280.4 PPR repeat
XP_057810372.1 Pfam PF01535 PPR Repeat 363 391 1.8e-62 204.0 PPR repeat
XP_057810372.1 Pfam PF01535 PPR Repeat 404 431 1.8e-62 204.0 PPR repeat
XP_057810372.1 Pfam PF13812 PPR_3 Repeat 425 478 1.4e-44 150.7 Pentatricopeptide repeat domain
XP_057810372.1 Pfam PF13041 PPR_2 Repeat 434 477 5e-98 321.8 PPR repeat family
XP_057810372.1 Pfam PF12854 PPR_1 Repeat 465 496 2.9e-85 280.4 PPR repeat
XP_057810372.1 Pfam PF13041 PPR_2 Repeat 468 516 5e-98 321.8 PPR repeat family
XP_057810372.1 Pfam PF01535 PPR Repeat 471 501 1.8e-62 204.0 PPR repeat
XP_057810372.1 Pfam PF13812 PPR_3 Repeat 496 553 1.4e-44 150.7 Pentatricopeptide repeat domain
XP_057810372.1 Pfam PF12854 PPR_1 Repeat 499 531 2.9e-85 280.4 PPR repeat
XP_057810372.1 Pfam PF23276 TPR_24 Repeat 528 635 1.5e-20 74.2 Pentatricopeptide repeat-containing protein
XP_057810372.1 Pfam PF01535 PPR Repeat 542 571 1.8e-62 204.0 PPR repeat
XP_057810372.1 Pfam PF13041 PPR_2 Repeat 542 582 5e-98 321.8 PPR repeat family
XP_057810372.1 Pfam PF17177 PPR_long Repeat 552 702 9.3e-23 81.4 Pentacotripeptide-repeat region of PRORP
XP_057810372.1 Pfam PF13812 PPR_3 Repeat 563 621 1.4e-44 150.7 Pentatricopeptide repeat domain
XP_057810372.1 Pfam PF01535 PPR Repeat 576 605 1.8e-62 204.0 PPR repeat
XP_057810372.1 Pfam PF13041 PPR_2 Repeat 578 621 5e-98 321.8 PPR repeat family
XP_057810372.1 Pfam PF12854 PPR_1 Repeat 604 636 2.9e-85 280.4 PPR repeat
XP_057810372.1 Pfam PF13041 PPR_2 Repeat 608 656 5e-98 321.8 PPR repeat family
XP_057810372.1 Pfam PF01535 PPR Repeat 611 641 1.8e-62 204.0 PPR repeat
XP_057810372.1 Pfam PF13812 PPR_3 Repeat 632 671 1.4e-44 150.7 Pentatricopeptide repeat domain
XP_057810372.1 Pfam PF12854 PPR_1 Repeat 639 671 2.9e-85 280.4 PPR repeat
XP_057810372.1 Pfam PF01535 PPR Repeat 646 672 1.8e-62 204.0 PPR repeat
XP_057810374.1 Pfam PF12854 PPR_1 Repeat 264 292 5.2e-85 279.5 PPR repeat
XP_057810374.1 Pfam PF13812 PPR_3 Repeat 264 311 1e-44 151.1 Pentatricopeptide repeat domain
XP_057810374.1 Pfam PF13041 PPR_2 Repeat 264 312 9.2e-101 330.6 PPR repeat family
XP_057810374.1 Pfam PF01535 PPR Repeat 268 296 2.7e-62 203.5 PPR repeat
XP_057810374.1 Pfam PF12854 PPR_1 Repeat 296 328 5.2e-85 279.5 PPR repeat
XP_057810374.1 Pfam PF13041 PPR_2 Repeat 299 348 9.2e-101 330.6 PPR repeat family
XP_057810374.1 Pfam PF01535 PPR Repeat 303 332 2.7e-62 203.5 PPR repeat
XP_057810374.1 Pfam PF12854 PPR_1 Repeat 330 361 5.2e-85 279.5 PPR repeat
XP_057810374.1 Pfam PF01535 PPR Repeat 337 365 2.7e-62 203.5 PPR repeat
XP_057810374.1 Pfam PF01535 PPR Repeat 378 405 2.7e-62 203.5 PPR repeat
XP_057810374.1 Pfam PF13812 PPR_3 Repeat 399 452 1e-44 151.1 Pentatricopeptide repeat domain
XP_057810374.1 Pfam PF13041 PPR_2 Repeat 408 456 9.2e-101 330.6 PPR repeat family
XP_057810374.1 Pfam PF12854 PPR_1 Repeat 439 470 5.2e-85 279.5 PPR repeat
XP_057810374.1 Pfam PF13041 PPR_2 Repeat 442 490 9.2e-101 330.6 PPR repeat family
XP_057810374.1 Pfam PF01535 PPR Repeat 445 475 2.7e-62 203.5 PPR repeat
XP_057810374.1 Pfam PF13812 PPR_3 Repeat 470 527 1e-44 151.1 Pentatricopeptide repeat domain
XP_057810374.1 Pfam PF12854 PPR_1 Repeat 473 505 5.2e-85 279.5 PPR repeat
XP_057810374.1 Pfam PF23276 TPR_24 Repeat 502 609 1.2e-20 74.5 Pentatricopeptide repeat-containing protein
XP_057810374.1 Pfam PF01535 PPR Repeat 516 545 2.7e-62 203.5 PPR repeat
XP_057810374.1 Pfam PF13041 PPR_2 Repeat 516 556 9.2e-101 330.6 PPR repeat family
XP_057810374.1 Pfam PF17177 PPR_long Repeat 526 676 7.6e-23 81.7 Pentacotripeptide-repeat region of PRORP
XP_057810374.1 Pfam PF13812 PPR_3 Repeat 537 595 1e-44 151.1 Pentatricopeptide repeat domain
XP_057810374.1 Pfam PF01535 PPR Repeat 550 579 2.7e-62 203.5 PPR repeat
XP_057810374.1 Pfam PF13041 PPR_2 Repeat 552 595 9.2e-101 330.6 PPR repeat family
XP_057810374.1 Pfam PF12854 PPR_1 Repeat 578 610 5.2e-85 279.5 PPR repeat
XP_057810374.1 Pfam PF13041 PPR_2 Repeat 582 630 9.2e-101 330.6 PPR repeat family
XP_057810374.1 Pfam PF01535 PPR Repeat 585 615 2.7e-62 203.5 PPR repeat
XP_057810374.1 Pfam PF13812 PPR_3 Repeat 606 645 1e-44 151.1 Pentatricopeptide repeat domain
XP_057810374.1 Pfam PF12854 PPR_1 Repeat 613 645 5.2e-85 279.5 PPR repeat
XP_057810374.1 Pfam PF13041 PPR_2 Repeat 617 666 9.2e-101 330.6 PPR repeat family
XP_057810374.1 Pfam PF01535 PPR Repeat 620 646 2.7e-62 203.5 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

7 records

下载 cDNA FASTA
XM_057954388.1
TTGAAAACCCCTAAATCTGTTGCCGCGCACACCTTCCCCTTTCTCTAGAGAACCTCAGCGGCTCAGCCTTCCCGGTTCCTTCCTCCCCTCCGCCGGCGACTAGCTGCAGCAGGTGACCGACGCCAGCGCAACTCCCCGGCTTATCCGACGCCGCCCTTCTCCCCTCCACGACGCCGCCCTTGTTCTGATTTAGTGATTTATACGTGTTAGTATTTGCTGAATTCTGATTTAGTATTTGCTGAATTTGTTACCTCCGATTT...
XM_057954387.1
TTGAAAACCCCTAAATCTGTTGCCGCGCACACCTTCCCCTTTCTCTAGAGAACCTCAGCGGCTCAGCCTTCCCGGTTCCTTCCTCCCCTCCGCCGGCGACTAGCTGCAGCAGGTGACCGACGCCAGCGCAACTCCCCGGCTTATCCGACGCCGCCCTTCTCCCCTCCACGACGCCGCCCTTGTTCTGATTTAGTGATTTATACGTGTTAGTATTTGCTGAATTCTGATTTAGTATTTGCTGAATTTGTTACCTCCGATTT...

CDS

7 records

下载 CDS FASTA
LOC131024851
ATGACGAGCCTGGTTGCCTGCTTGAAGCGACGCTGTCTTTCTCTTCATTTCGCGCCTTTGGGGAATGGAAACCCTGATGAGGCGATCAGGTTGAGGCTGATGCTGCTCAGAGGGCCCAACTATATTGTAAATAGAATGCATGGTGCTGATAGCTCGTTGAGATTGTTTCAGCCCAAATTTGTGCATGGTGAAAGTCCTTCTGCTGAATATGCAAAGTTGAGGAAAGAGTCACTAGAAGGCCAATTTGGACGTATGCTGGG...
LOC131024851
ATGACGAGCCTGGTTGCCTGCTTGAAGCGACGCTGTCTTTCTCTTCATTTCGCGCCTTTGGGGAATGGAAACCCTGATGAGGCGATCAGGTTGAGGCTGATGCTGCTCAGAGGGCCCAACTATATTGTAAATAGAATGCATGGTGCTGATAGCTCGTTGAGATTGTTTCAGCCCAAATTTTTCTCTACTGACTATTTCAGTGTGCATGGTGAAAGTCCTTCTGCTGAATATGCAAAGTTGAGGAAAGAGTCACTAGAAGG...

Protein

7 records

下载 Protein FASTA
XP_057810367.1
MTSLVACLKRRCLSLHFAPLGNGNPDEAIRLRLMLLRGPNYIVNRMHGADSSLRLFQPKFFSTDYFSVHGESPSAEYAKLRKESLEGQFGRMLGSKSVSVLYRFGTFLAVYKSATISFYVLKLTIWRFFVHDMNKRSVKFREMLIRLGPFYIKILVPAQGSYFIFRILNGSVQAIDSFKDLISIYFSRFLRLNSSLGLNESRSVSRHRNEVEETSEAGDKEPRGAVFNALDAMLKGSLDRLKTMRESIRWVHSSSYSVIF...
XP_057810368.1
MTSLVACLKRRCLSLHFAPLGNGNPDEAIRLRLMLLRGPNYIVNRMHGADSSLRLFQPKFFSTDYFSVHGESPSAEYAKLRKESLEGQFGRMLGSKSVSVLYRFGTFLAVYKSATISFYVLKLTIWRFFVHDMNKRSVKFREMLIRLGPFYIKILVPAQGSYFIFRILNGSVQAIDSFKDLISIYFSRFLRLNSSLGLNESRSVSRHRNEVEETSEAGDKEPRGAVFNALDAMLKGSLDRLKTMRESIRWVHSSSYSVIF...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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