当前解析结果
SmilChr05G003860| 统一新 Gene ID | SmilChr05G003860 |
|---|---|
| 名称 | SmilChr05G003860 |
| 描述 | uncharacterized SmilChr05G003860 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 52139954 - 52144804 / - |
| NCBI Gene ID | LOC131024984 |
|---|---|
| GeneID | 131024984 |
| locus_tag | - |
| NCBI Name | LOC131024984 |
| 原始查询 | LOC131024984 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831005]; symbol=AT5G11340; hit=AT5G11340; species=arabidopsis; confidence=high |
| 产物 | Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831005]; symbol=AT5G11340; hit=AT5G11340; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G11340 (AT5G11340)Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831005] identity=77.8; qcov=0.982; evalue=1.19e-95; confidence=high |
| Rice | Os01g0610400- identity=79.4; qcov=0.939; evalue=1.13e-89; confidence=high |
| GO | GO:0005737 (cytoplasm); GO:0007064 (mitotic sister chromatid cohesion); GO:0008080 (N-acetyltransferase activity); GO:0016573 (GO:0016573); GO:0031415 (NatA complex) |
| KEGG | - |
| Pfam | PF00583 (Acetyltransf_1); PF08445 (FR47); PF13420 (Acetyltransf_4); PF13508 (Acetyltransf_7); PF13673 (Acetyltransf_10) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024984 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057810560.1 |
| 2 | Cytoplasm | 细胞质 | 1.00000 | XP_057810560.1 |
| 3 | Cytosol | 细胞质基质 | 1.00000 | XP_057810560.1 |
| 4 | Nucleoplasm | 核质 | 0.60000 | XP_057810560.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057810560.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:52143497 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B117 |
Chr5:52143509 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B76 |
Chr5:52143527 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B97 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057810560.1PF00583
Acetyltransf_1 25-133 aa
PF13673
Acetyltransf_10 36-137 aa
PF13508
Acetyltransf_7 57-134 aa
PF08445
FR47 78-136 aa
PF13420
Acetyltransf_4 91-143 aa
XP_057810561.1PF00583
Acetyltransf_1 25-133 aa
PF13673
Acetyltransf_10 36-137 aa
PF13508
Acetyltransf_7 57-134 aa
PF08445
FR47 78-136 aa
PF13420
Acetyltransf_4 91-143 aa
XP_057810562.1PF00583
Acetyltransf_1 25-133 aa
PF13673
Acetyltransf_10 36-137 aa
PF13508
Acetyltransf_7 57-134 aa
PF08445
FR47 78-136 aa
PF13420
Acetyltransf_4 91-143 aa
XP_057810563.1PF00583
Acetyltransf_1 25-133 aa
PF13673
Acetyltransf_10 36-137 aa
PF13508
Acetyltransf_7 57-134 aa
PF08445
FR47 78-136 aa
PF13420
Acetyltransf_4 91-143 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057810560.1 |
Pfam | PF00583 |
Acetyltransf_1 | Family | 25 | 133 | 5.8e-19 | 69.2 | Acetyltransferase (GNAT) family |
XP_057810560.1 |
Pfam | PF13673 |
Acetyltransf_10 | Domain | 36 | 137 | 3.8e-11 | 43.8 | Acetyltransferase (GNAT) domain |
XP_057810560.1 |
Pfam | PF13508 |
Acetyltransf_7 | Domain | 57 | 134 | 1.7e-12 | 48.3 | Acetyltransferase (GNAT) domain |
XP_057810560.1 |
Pfam | PF08445 |
FR47 | Family | 78 | 136 | 2.1e-05 | 25.1 | FR47-like protein |
XP_057810560.1 |
Pfam | PF13420 |
Acetyltransf_4 | Domain | 91 | 143 | 8.3e-06 | 26.6 | Acetyltransferase (GNAT) domain |
XP_057810561.1 |
Pfam | PF00583 |
Acetyltransf_1 | Family | 25 | 133 | 5.8e-19 | 69.2 | Acetyltransferase (GNAT) family |
XP_057810561.1 |
Pfam | PF13673 |
Acetyltransf_10 | Domain | 36 | 137 | 3.8e-11 | 43.8 | Acetyltransferase (GNAT) domain |
XP_057810561.1 |
Pfam | PF13508 |
Acetyltransf_7 | Domain | 57 | 134 | 1.7e-12 | 48.3 | Acetyltransferase (GNAT) domain |
XP_057810561.1 |
Pfam | PF08445 |
FR47 | Family | 78 | 136 | 2.1e-05 | 25.1 | FR47-like protein |
XP_057810561.1 |
Pfam | PF13420 |
Acetyltransf_4 | Domain | 91 | 143 | 8.3e-06 | 26.6 | Acetyltransferase (GNAT) domain |
XP_057810562.1 |
Pfam | PF00583 |
Acetyltransf_1 | Family | 25 | 133 | 5.8e-19 | 69.2 | Acetyltransferase (GNAT) family |
XP_057810562.1 |
Pfam | PF13673 |
Acetyltransf_10 | Domain | 36 | 137 | 3.8e-11 | 43.8 | Acetyltransferase (GNAT) domain |
XP_057810562.1 |
Pfam | PF13508 |
Acetyltransf_7 | Domain | 57 | 134 | 1.7e-12 | 48.3 | Acetyltransferase (GNAT) domain |
XP_057810562.1 |
Pfam | PF08445 |
FR47 | Family | 78 | 136 | 2.1e-05 | 25.1 | FR47-like protein |
XP_057810562.1 |
Pfam | PF13420 |
Acetyltransf_4 | Domain | 91 | 143 | 8.3e-06 | 26.6 | Acetyltransferase (GNAT) domain |
XP_057810563.1 |
Pfam | PF00583 |
Acetyltransf_1 | Family | 25 | 133 | 5.8e-19 | 69.2 | Acetyltransferase (GNAT) family |
XP_057810563.1 |
Pfam | PF13673 |
Acetyltransf_10 | Domain | 36 | 137 | 3.8e-11 | 43.8 | Acetyltransferase (GNAT) domain |
XP_057810563.1 |
Pfam | PF13508 |
Acetyltransf_7 | Domain | 57 | 134 | 1.7e-12 | 48.3 | Acetyltransferase (GNAT) domain |
XP_057810563.1 |
Pfam | PF08445 |
FR47 | Family | 78 | 136 | 2.1e-05 | 25.1 | FR47-like protein |
XP_057810563.1 |
Pfam | PF13420 |
Acetyltransf_4 | Domain | 91 | 143 | 8.3e-06 | 26.6 | Acetyltransferase (GNAT) domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。