当前解析结果
SmilChr05G004097| 统一新 Gene ID | SmilChr05G004097 |
|---|---|
| 名称 | SmilChr05G004097 |
| 描述 | nodulin-related protein 2-like |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 54821311 - 54822030 / - |
| NCBI Gene ID | LOC131025158 |
|---|---|
| GeneID | 131025158 |
| locus_tag | - |
| NCBI Name | LOC131025158 |
| 原始查询 | LOC131025158 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nodulin-related protein 2-like |
| 产物 | nodulin-related protein 2-like |
| Arabidopsis | AT1G13930 (AT1G13930)oleosin-B3-like protein [Source:NCBI gene (formerly Entrezgene);Acc:837953] identity=39.6; qcov=1.08; evalue=9.2e-18; confidence=low |
| Rice | -- |
| GO | GO:0009408 (response to heat); GO:0010115 (regulation of abscisic acid biosynthetic process) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025158 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057810772.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057810772.1 |
| 3 | Cell membrane | 细胞膜 | 0.20000 | XP_057810772.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057810772.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057810772.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:54821520 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:54821556 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:54821566 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C51 |
Chr5:54821580 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B110,C82 |
Chr5:54821660 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B19,C10,C63 |
Chr5:54821674 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:54821709 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B139 |
Chr5:54821742 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B84,C82 |
Chr5:54821808 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B139 |
Chr5:54821860 |
G |
GA |
1bp_insertion | frameshift_variant | 1 | B94 |
Chr5:54821860 |
G |
GA |
1bp_insertion | CDS_variant | 1 | B94 |
Chr5:54821953 |
AT |
A |
1bp_deletion | frameshift_variant | 6 | B35,B57,B93,C12,C74,D1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。