当前解析结果
SmilChr05G004181| 统一新 Gene ID | SmilChr05G004181 |
|---|---|
| 名称 | SmilChr05G004181 |
| 描述 | uncharacterized SmilChr05G004181 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 55717150 - 55722067 / - |
| NCBI Gene ID | LOC131025233 |
|---|---|
| GeneID | 131025233 |
| locus_tag | - |
| NCBI Name | LOC131025233 |
| 原始查询 | LOC131025233 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | heat-inducible transcription repressor [Source:NCBI gene (formerly Entrezgene);Acc:821058]; symbol=AT3G17900; hit=AT3G17900; species=arabidopsis; confidence=high |
| 产物 | heat-inducible transcription repressor [Source:NCBI gene (formerly Entrezgene);Acc:821058]; symbol=AT3G17900; hit=AT3G17900; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G17900 (AT3G17900)heat-inducible transcription repressor [Source:NCBI gene (formerly Entrezgene);Acc:821058] identity=45.2; qcov=1.06; evalue=0; confidence=high |
| Rice | Os03g0152800- identity=38.6; qcov=1.08; evalue=2.36e-154; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025233 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.60000 | XP_057810883.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057810883.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057810883.1 |
| 4 | Cytoplasmic vesicle | 细胞质囊泡 | 0.20000 | XP_057810883.1 |
| 5 | Autophagic vesicle | Autophagic vesicle | 0.20000 | XP_057810883.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:55717530 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr5:55717781 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A23,B13,B131,C31,D6 |
Chr5:55717787 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr5:55717815 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D5 |
Chr5:55717862 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C20 |
Chr5:55717878 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B19,C10,C63 |
Chr5:55717885 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A18,B115,B48,B73,B94 |
Chr5:55717920 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B109,B121,C24,C72 |
Chr5:55718041 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B112,B132,B28 |
Chr5:55718270 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A23,B13,B131,C31 |
Chr5:55718303 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A22,C25 |
Chr5:55718355 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B62 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。