当前解析结果
SmilChr05G001560| 统一新 Gene ID | SmilChr05G001560 |
|---|---|
| 名称 | SmilChr05G001560 |
| 描述 | nodulin-related protein 1-like |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 14296343 - 14296823 / + |
| NCBI Gene ID | LOC131025547 |
|---|---|
| GeneID | 131025547 |
| locus_tag | - |
| NCBI Name | LOC131025547 |
| 原始查询 | LOC131025547 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | nodulin-related protein 1-like |
| 产物 | nodulin-related protein 1-like |
| Arabidopsis | AT2G03440 (NRP1)nodulin-related protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:814873] identity=39.9; qcov=0.965; evalue=1.85e-14; confidence=low |
| Rice | Os10g0330000- identity=49.3; qcov=0.524; evalue=3.48e-13; confidence=low |
| GO | GO:0009408 (response to heat); GO:0010115 (regulation of abscisic acid biosynthetic process) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025547 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057811324.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057811324.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057811324.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057811324.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057811324.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:14296354 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr5:14296366 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B55,C60 |
Chr5:14296381 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B15,B53,B65,B89 |
Chr5:14296445 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr5:14296446 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B99,C87 |
Chr5:14296456 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B33,B46,C60 |
Chr5:14296477 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C12,C14,C45 |
Chr5:14296514 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B117 |
Chr5:14296531 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B3,C23,D6 |
Chr5:14296532 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,C59 |
Chr5:14296540 |
CGT |
C |
2bp_deletion | frameshift_variant | 5 | A20,B121,B22,B80,C41 |
Chr5:14296540 |
CGT |
C |
2bp_deletion | CDS_variant | 5 | A20,B121,B22,B80,C41 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。