当前解析结果
SmilChr01G002462| 统一新 Gene ID | SmilChr01G002462 |
|---|---|
| 名称 | SmilChr01G002462 |
| 描述 | flavonoid 3'-monooxygenase CYP75B137-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 42298727 - 42301733 / + |
| NCBI Gene ID | LOC131025647 |
|---|---|
| GeneID | 131025647 |
| locus_tag | - |
| NCBI Name | LOC131025647 |
| 原始查询 | LOC131025647 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | flavonoid 3'-monooxygenase CYP75B137-like |
| 产物 | flavonoid 3'-monooxygenase CYP75B137-like |
| Arabidopsis | AT4G12300 (CYP706A4)cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:NCBI gene (formerly Entrezgene);Acc:826839] identity=56.9; qcov=1.01; evalue=0; confidence=high |
| Rice | Os01g0700500- identity=55.2; qcov=0.819; evalue=3.73e-174; confidence=high |
| GO | GO:0004497 (monooxygenase activity); GO:0005506 (iron ion binding); GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen); GO:0020037 (heme binding) |
| KEGG | - |
| Pfam | PF00067 (p450) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025647 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057811432.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057811432.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057811432.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057811432.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057811432.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:42299085 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B109,B55,C74 |
Chr1:42299107 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr1:42299308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A5,B50,B8,C56 |
Chr1:42299317 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C42 |
Chr1:42299407 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B72,C32,C68 |
Chr1:42299478 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:42299632 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A18,B130,B85,C39,D10 |
Chr1:42299698 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr1:42299705 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C2 |
Chr1:42299773 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B68,C42 |
Chr1:42299806 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr1:42301002 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057811432.1PF00067
p450 50-502 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057811432.1 |
Pfam | PF00067 |
p450 | Domain | 50 | 502 | 1.6e-105 | 354.3 | Cytochrome P450 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。