Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G002511`

染色体: Chr01 坐标: 43005651-43008379 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G002511`
名称	SmilChr01G002511
描述	uncharacterized SmilChr01G002511
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	43005651 - 43008379 / `+`

ID 对照

NCBI Gene ID	`LOC131025995`
GeneID	`131025995`
locus_tag	`-`
NCBI Name	`LOC131025995`
原始查询	`LOC131025995`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895]; symbol=AT2G14095; hit=AT2G14095; species=arabidopsis; confidence=low
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895]; symbol=AT2G14095; hit=AT2G14095; species=arabidopsis; confidence=low
Arabidopsis	`AT2G14095` (AT2G14095) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:815895] identity=33; qcov=0.593; evalue=6.95e-10; confidence=low
Rice	`Os08g0483600` (OJ1111_H02.21-1) - identity=25.8; qcov=1.02; evalue=2.48e-08; confidence=low
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131025995

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057811758.1`
2	Chloroplast thylakoid	类囊体	1.00000	`XP_057811758.1`
3	Chloroplast thylakoid membrane	类囊体膜	0.80000	`XP_057811761.1`
4	Chloroplast stroma	叶绿体基质	0.20000	`XP_057811758.1`
5	Nucleus	细胞核	0.00000	`XP_057811758.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:43005966`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B13,B131,B78
`Chr1:43007105`	`GA`	`G`	1bp_deletion	frameshift_variant	8	B106,B120,B42,B43,B54,B58,C52,C72
`Chr1:43007117`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D4
`Chr1:43007128`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B104,C45,C58,C75
`Chr1:43007130`	`AC`	`A`	1bp_deletion	frameshift_variant	2	B106,B120
`Chr1:43007130`	`AC`	`A`	1bp_deletion	CDS_variant	2	B106,B120
`Chr1:43007136`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B120,C52
`Chr1:43007137`	`GAA`	`G`	2bp_deletion	frameshift_variant	2	B106,B120
`Chr1:43007137`	`GAA`	`G`	2bp_deletion	CDS_variant	2	B106,B120
`Chr1:43007142`	`A`	`ATT`	2bp_insertion	frameshift_variant	2	B106,B120
`Chr1:43007142`	`A`	`ATT`	2bp_insertion	CDS_variant	2	B106,B120
`Chr1:43007149`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B42,B43,B58

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057955778.1
TCAATATCTATCTTCATTAAAAGATTAGGCCAAATTAAGCACGAGGCACCACGAGAGAGAGACCTTTTCTTTGCGCCAATCAAATAGAGTCAACGTCTCCACTCTCCTTCATCTATATATTCATCTCCATCCCAATATTCAAATTAAAACACCAAATTAACTTCAATTATTTTTCGATCTTATTACTTATATGGCTACATCTTCTTCCACTCCCATCGCACCCCTTCTCAACAATAAAAATTCTCACAATCATAAAAATT...

XM_057955775.1
GCACCACGAGAGAGAGACCTTTTCTTTGCGCCAATCAAATAGAGTCAACGTCTCCACTCTCCTTCATCTATATATTCATCTCCATCCCAATATTCAAATTAAAACACCAAATTAACTTCAATTATTTTTCGATCTTATTACTTATATGGCTACATCTTCTTCCACTCCCATCGCACCCCTTCTCAACAATAAAAATTCTCACAATCATAAAAATTTCAATGATGATGGCCAATTCTCTTTTCCCCGCCGGAGTAGTTTCC...

CDS

2 records

下载 CDS FASTA

LOC131025995
ATGGCTACATCTTCTTCCACTCCCATCGCACCCCTTCTCAACAATAAAAATTCTCACAATCATAAAAATTTCAATGATGATGGCCAATTCTCTTTTCCCCGCCGGAGTAGTTTCCACAAATTTTCCATAACAAGCCCATCAAACAATTTCAGAGATCTGGTTACCCGGAGAGCTACGCCGGAGGTTGCCGGAGATCTTCTCTCTCAATTCCATATCCCCGGCATACCGTCATGGTTCCCTACGGACAATCCATGGTTTGT...

LOC131025995
ATGGCTACATCTTCTTCCACTCCCATCGCACCCCTTCTCAACAATAAAAATTCTCACAATCATAAAAATTTCAATGATGATGGCCAATTCTCTTTTCCCCGCCGGAGTAGTTTCCACAAATTTTCCATAACAAGCCCATCAAACAAAGATCTGGTTACCCGGAGAGCTACGCCGGAGGTTGCCGGAGATCTTCTCTCTCAATTCCATATCCCCGGCATACCGTCATGGTTCCCTACGGACAATCCATGGTTTGTTGGTGC...

Protein

2 records

下载 Protein FASTA

XP_057811758.1
MATSSSTPIAPLLNNKNSHNHKNFNDDGQFSFPRRSSFHKFSITSPSNNFRDLVTRRATPEVAGDLLSQFHIPGIPSWFPTDNPWFVGASGLLVGGPFLIQRLIAFTKQLDMAAQAVENIADVVENVAKKVEDAAEEFEASLPESRLKEVVHFVEHLAEETAEEADKIGDLMDKVEEFDDKLEAFLDKQLKHTDKA

XP_057811761.1
MATSSSTPIAPLLNNKNSHNHKNFNDDGQFSFPRRSSFHKFSITSPSNKDLVTRRATPEVAGDLLSQFHIPGIPSWFPTDNPWFVGASGLLVGGPFLIQRLIAFTKQLDMAAQAVENIADVVENVAKKVEDAAEEFEASLPESRLKEVVHFVEHLAEETAEEADKIGDLMDKVEEFDDKLEAFLDKQLKHTDKA

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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