当前解析结果
SmilChr05G003563| 统一新 Gene ID | SmilChr05G003563 |
|---|---|
| 名称 | SmilChr05G003563 |
| 描述 | membrane-bound O-acyltransferase gup1-like |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 47562970 - 47563805 / + |
| NCBI Gene ID | LOC131026038 |
|---|---|
| GeneID | 131026038 |
| locus_tag | - |
| NCBI Name | LOC131026038 |
| 原始查询 | LOC131026038 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | membrane-bound O-acyltransferase gup1-like |
| 产物 | membrane-bound O-acyltransferase gup1-like |
| Arabidopsis | AT1G57600 (AT1G57600)MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842136] identity=65.9; qcov=1; evalue=1.44e-37; confidence=medium |
| Rice | Os05g0144000- identity=60.4; qcov=1; evalue=6.11e-33; confidence=medium |
| GO | GO:0005783 (endoplasmic reticulum); GO:0016746 (acyltransferase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131026038 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057811796.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057811796.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057811796.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057811796.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057811796.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:47563003 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B40,B66 |
Chr5:47563013 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B131,B53,C60,D2 |
Chr5:47563016 |
CT |
C |
1bp_deletion | frameshift_variant | 5 | A11,B54,B70,B94,D6 |
Chr5:47563016 |
CT |
C |
1bp_deletion | CDS_variant | 5 | A11,B54,B70,B94,D6 |
Chr5:47563061 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | B87,D1 |
Chr5:47563061 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B87,D1 |
Chr5:47563544 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B41,C33 |
Chr5:47563556 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | B64,B92 |
Chr5:47563556 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B64,B92 |
Chr5:47563594 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:47563726 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | D6 |
Chr5:47563726 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。