当前解析结果
SmilChr05G003592| 统一新 Gene ID | SmilChr05G003592 |
|---|---|
| 名称 | SmilChr05G003592 |
| 描述 | uncharacterized SmilChr05G003592 |
| 染色体 / SeqID | Chr05 / NC_080391.1 |
| 坐标与链方向 | 48020752 - 48021772 / - |
| NCBI Gene ID | LOC131026050 |
|---|---|
| GeneID | 131026050 |
| locus_tag | - |
| NCBI Name | LOC131026050 |
| 原始查询 | LOC131026050 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0597300; species=rice; confidence=weak |
| 产物 | hit=Os12g0597300; species=rice; confidence=weak |
| Arabidopsis | AT1G06740 (MUG3)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669] identity=20.9; qcov=0.987; evalue=6.68e-12; confidence=weak |
| Rice | Os12g0597300- identity=23.6; qcov=1.05; evalue=3.83e-16; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131026050 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057811810.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057811810.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057811810.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057811810.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057811810.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr5:48020756 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A23,B101,B68,D6 |
Chr5:48020810 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A23,B108,B122,C35 |
Chr5:48020834 |
G |
GA |
1bp_insertion | frameshift_variant | 17 | A2,A21,B110,B13,B139,B34,B4,B47,B51,B52,B64,B65,B75,C13,C56,C65,C76 |
Chr5:48020862 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C68 |
Chr5:48020893 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr5:48020922 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B33,B58,C32,C68 |
Chr5:48020950 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B33,B58,C32,C68 |
Chr5:48021007 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B108,B122,C35 |
Chr5:48021010 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B4,B64 |
Chr5:48021020 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr5:48021049 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr5:48021067 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。