Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G002463`

染色体: Chr05 坐标: 27144443-27148428 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G002463`
名称	SmilChr05G002463
描述	uncharacterized SmilChr05G002463
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	27144443 - 27148428 / `+`

ID 对照

NCBI Gene ID	`LOC131026238`
GeneID	`131026238`
locus_tag	`-`
NCBI Name	`LOC131026238`
原始查询	`LOC131026238`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	translocator assembly/maintenance protein [Source:NCBI gene (formerly Entrezgene);Acc:823917]; symbol=AT3G47630; hit=AT3G47630; species=arabidopsis; confidence=high
产物	translocator assembly/maintenance protein [Source:NCBI gene (formerly Entrezgene);Acc:823917]; symbol=AT3G47630; hit=AT3G47630; species=arabidopsis; confidence=high
Arabidopsis	`AT3G47630` (AT3G47630) translocator assembly/maintenance protein [Source:NCBI gene (formerly Entrezgene);Acc:823917] identity=58.8; qcov=1.07; evalue=2.51e-131; confidence=high
Rice	`Os11g0549650` - identity=55.4; qcov=0.698; evalue=1.05e-77; confidence=high
GO	GO:0004605 (phosphatidate cytidylyltransferase activity); GO:0005739 (mitochondrion); GO:0016024 (CDP-diacylglycerol biosynthetic process); GO:0032049 (cardiolipin biosynthetic process)
KEGG	-
Pfam	PF09139 (Tam41_Mmp37)
InterPro	-
eggNOG	-
NR	GeneID:131026238

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057812009.1`
2	Mitochondrion membrane	线粒体膜	0.80000	`XP_057812009.1`
3	Mitochondrion inner membrane	线粒体内膜	0.60000	`XP_057812009.1`
4	Nucleus	细胞核	0.00000	`XP_057812009.1`
5	Chromosome	染色体	0.00000	`XP_057812009.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:27146550`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B99,C35
`Chr5:27146918`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057812009.1

331 aa

166

331

Tam41_Mmp37

PF09139 Tam41_Mmp37 12-325 aa

XP_057812010.1

331 aa

166

331

Tam41_Mmp37

PF09139 Tam41_Mmp37 12-325 aa

XP_057812011.1

331 aa

166

331

Tam41_Mmp37

PF09139 Tam41_Mmp37 12-325 aa

XP_057812012.1

308 aa

154

308

Tam41_Mmp37

PF09139 Tam41_Mmp37 12-72 aa PF09139 Tam41_Mmp37 76-302 aa

XP_057812013.1

308 aa

154

308

Tam41_Mmp37

PF09139 Tam41_Mmp37 12-72 aa PF09139 Tam41_Mmp37 76-302 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057812009.1`	Pfam	`PF09139`	Tam41_Mmp37	Family	12	325	1e-100	338.0	Phosphatidate cytidylyltransferase, mitochondrial
`XP_057812010.1`	Pfam	`PF09139`	Tam41_Mmp37	Family	12	325	1e-100	338.0	Phosphatidate cytidylyltransferase, mitochondrial
`XP_057812011.1`	Pfam	`PF09139`	Tam41_Mmp37	Family	12	325	1e-100	338.0	Phosphatidate cytidylyltransferase, mitochondrial
`XP_057812012.1`	Pfam	`PF09139`	Tam41_Mmp37	Family	12	72	6.5e-87	292.6	Phosphatidate cytidylyltransferase, mitochondrial
`XP_057812012.1`	Pfam	`PF09139`	Tam41_Mmp37	Family	76	302	6.5e-87	292.6	Phosphatidate cytidylyltransferase, mitochondrial
`XP_057812013.1`	Pfam	`PF09139`	Tam41_Mmp37	Family	12	72	6.5e-87	292.6	Phosphatidate cytidylyltransferase, mitochondrial
`XP_057812013.1`	Pfam	`PF09139`	Tam41_Mmp37	Family	76	302	6.5e-87	292.6	Phosphatidate cytidylyltransferase, mitochondrial

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057956027.1
ATCTCTTTCTCTTCTTTAACACAACAAACGCACACGAACACACACTCAGGCGCCGCTCTTCCTCCTTCCGGCGAAGCCGCGCCTGAGCGCCGCTCCCCTCGTCCCTCTGATCTCCCTTTCTCTCCGATTTTACAACGCACGCACAATTCCCCCCCCCCCCCCCCCCGCGTCGACGGCAGCCACGGCCGCCTGCTCCCCATTCTCTCCGGTTGCAGCGGCCGTCCCATGAAAGCCACCACCGCCCTCACACTGGAAACTGA...

XM_057956030.1
ATCTCTTTCTCTTCTTTAACACAACAAACGCACACGAACACACACTCAGGCGCCGCTCTTCCTCCTTCCGGCGAAGCCGCGCCTGAGCGCCGCTCCCCTCGTCCCTCTGATCTCCCTTTCTCTCCGATTTTACAACGCACGCACAATTCCCCCCCCCCCCCCCCCCGCGTCGACGGCAGCCACGGCCGCCTGCTCCCCATTCTCTCCGGTTGCAGCGGCCGTCCCATGAAAGCCACCACCGCCCTCACACTGGAAACTGA...

CDS

5 records

下载 CDS FASTA

LOC131026238
ATGGGCGCTGAAATGAGAGCTGAGCATGCAAGTTTTCTCGACACTCTACCTCCTGTTGAGTTCGCCTGTATATATGGCTCCTCTCTCCATCCAAACAATTTTGATAAGAAATCCATGGTAGATTACATTCTTGGTGTAGCAAATCCTCAGCAATGGCACGCAGAGAATCTGAAGTTAAATCGGAATCATTATGCATCATGGATGGTCCACCTTGGGGGAGCGCGTCTGATAACCGGTGTTGCTGATCATATTGGTGTCCG...

Protein

5 records

下载 Protein FASTA

XP_057812009.1
MGAEMRAEHASFLDTLPPVEFACIYGSSLHPNNFDKKSMVDYILGVANPQQWHAENLKLNRNHYASWMVHLGGARLITGVADHIGVRVHFNPFVSHRDRMFKYGVVRMNDLVQDILVWESFYLSGRLQKPVNVIVDNSEIEKLNFVNVKAAASAALLLLPSKFSEEELYAKICSLSYMGDLRMLFAEDRNKVKKIVQGQFKLFQKMYNPFIEEFAAQDLLRLSSSADQKVNLIQDCGLSTTCSLVSSLPLPLRCHTGMKL...

XP_057812010.1
MGAEMRAEHASFLDTLPPVEFACIYGSSLHPNNFDKKSMVDYILGVANPQQWHAENLKLNRNHYASWMVHLGGARLITGVADHIGVRVHFNPFVSHRDRMFKYGVVRMNDLVQDILVWESFYLSGRLQKPVNVIVDNSEIEKLNFVNVKAAASAALLLLPSKFSEEELYAKICSLSYMGDLRMLFAEDRNKVKKIVQGQFKLFQKMYNPFIEEFAAQDLLRLSSSADQKVNLIQDCGLSTTCSLVSSLPLPLRCHTGMKL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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