Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr05G002616`

染色体: Chr05 坐标: 29428360-29431575 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr05G002616`
名称	SmilChr05G002616
描述	alpha N-terminal protein methyltransferase 1-like
染色体 / SeqID	Chr05 / NC_080391.1
坐标与链方向	29428360 - 29431575 / `-`

ID 对照

NCBI Gene ID	`LOC131026369`
GeneID	`131026369`
locus_tag	`-`
NCBI Name	`LOC131026369`
原始查询	`LOC131026369`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	alpha N-terminal protein methyltransferase 1-like
产物	alpha N-terminal protein methyltransferase 1-like
Arabidopsis	`AT5G44450` (AT5G44450) alpha amino-terminal protein methyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:834472] identity=66.2; qcov=0.756; evalue=6.36e-92; confidence=high
Rice	`Os03g0780900` - identity=54.3; qcov=0.862; evalue=6.49e-73; confidence=high
GO	GO:0005737 (cytoplasm); GO:0006480 (N-terminal protein amino acid methylation); GO:0008168 (methyltransferase activity)
KEGG	-
Pfam	PF05891 (Methyltransf_PK); PF08241 (Methyltransf_11); PF13649 (Methyltransf_25)
InterPro	-
eggNOG	-
NR	GeneID:131026369

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057812216.1`
2	Cytosol	细胞质基质	1.00000	`XP_057812218.1`
3	Cytoplasm	细胞质	1.00000	`XP_057812216.1`
4	Peroxisome	过氧化物酶体	0.40000	`XP_057812217.1`
5	Mitochondrion	线粒体	0.20000	`XP_057812217.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr5:29428618`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A11,B28,B48
`Chr5:29428742`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C65
`Chr5:29428806`	`G`	`A`	EMS_canonical_SNV	stop_gained	25	A14,B10,B109,B118,B119,B121,B128,B17,B41,B49,B52,B6,B61,B67,B71,B75,B80,B93,B99,C20,C24,C3,C64,C8,D3
`Chr5:29428814`	`CTT`	`C`	2bp_deletion	frameshift_variant	6	A9,B73,C18,C23,C79,D7
`Chr5:29430346`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B16,B36,B84,C4,D4
`Chr5:29430401`	`TG`	`T`	1bp_deletion	frameshift_variant	2	C13,C22
`Chr5:29430401`	`TG`	`T`	1bp_deletion	CDS_variant	2	C13,C22
`Chr5:29430417`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	D10,D11
`Chr5:29430446`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C42,C86
`Chr5:29430448`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A11,B28,B68
`Chr5:29430451`	`GAA`	`G`	2bp_deletion	frameshift_variant	5	A23,B120,B15,B74,B99
`Chr5:29430451`	`GAA`	`G`	2bp_deletion	CDS_variant	5	A23,B120,B15,B74,B99

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057812216.1

315 aa

158

315

Methyltransf_PK

Methyltransf_25

Methyltransf_11

PF05891 Methyltransf_PK 69-292 aa PF13649 Methyltransf_25 129-230 aa PF08241 Methyltransf_11 129-234 aa

XP_057812217.1

281 aa

140

281

Methyltransf_PK

PF05891 Methyltransf_PK 69-189 aa PF05891 Methyltransf_PK 191-258 aa

XP_057812218.1

254 aa

127

254

Methyltransf_PK

Methyltransf_11

Methyltransf_25

PF05891 Methyltransf_PK 69-224 aa PF08241 Methyltransf_11 129-220 aa PF13649 Methyltransf_25 129-222 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057812216.1`	Pfam	`PF05891`	Methyltransf_PK	Family	69	292	3.1e-92	308.7	AdoMet dependent proline di-methyltransferase
`XP_057812216.1`	Pfam	`PF13649`	Methyltransf_25	Domain	129	230	9e-10	39.8	Methyltransferase domain
`XP_057812216.1`	Pfam	`PF08241`	Methyltransf_11	Domain	129	234	6e-09	37.1	Methyltransferase domain
`XP_057812217.1`	Pfam	`PF05891`	Methyltransf_PK	Family	69	189	2.1e-64	217.8	AdoMet dependent proline di-methyltransferase
`XP_057812217.1`	Pfam	`PF05891`	Methyltransf_PK	Family	191	258	2.1e-64	217.8	AdoMet dependent proline di-methyltransferase
`XP_057812218.1`	Pfam	`PF05891`	Methyltransf_PK	Family	69	224	1.2e-60	205.5	AdoMet dependent proline di-methyltransferase
`XP_057812218.1`	Pfam	`PF08241`	Methyltransf_11	Domain	129	220	2.4e-05	25.6	Methyltransferase domain
`XP_057812218.1`	Pfam	`PF13649`	Methyltransf_25	Domain	129	222	2.2e-07	32.2	Methyltransferase domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057956233.1
GGTACAACATAATGATGGCGTGAATCGGGATGTACCACCTCCTACTGCACAGAACCCCTATTCCCATTATTCCTGAGAGTCGCCCACCGCACAAATCTAGTTTGTCGAGAGTTGGTATGAATCAGCTCAACTGCGTCCAAATGGACGGCGGTGGAGTGGACTCCGACGGCCGCCAATTCAAGAGCGCGGAGGAGATGTGGCGGGAAGCGGTGGGGGACGGCGACCCCCTCAAGAAATCGCAGTGGTATTCGCAGGGCGTC...

XM_057956234.1
AATGATGGCGTGAATCGGGATGTACCACCTCCTACTGCACAGAACCCCTATTCCCATTATTCCTGAGAGTCGCCCACCGCACAAATCTAGTTTGTCGAGAGTTGGTATGAATCAGCTCAACTGCGTCCAAATGGACGGCGGTGGAGTGGACTCCGACGGCCGCCAATTCAAGAGCGCGGAGGAGATGTGGCGGGAAGCGGTGGGGGACGGCGACCCCCTCAAGAAATCGCAGTGGTATTCGCAGGGCGTCGGCTATTGGC...

CDS

3 records

下载 CDS FASTA

LOC131026369
ATGTACCACCTCCTACTGCACAGAACCCCTATTCCCATTATTCCTGAGAGTCGCCCACCGCACAAATCTAGTTTGTCGAGAGTTGGTATGAATCAGCTCAACTGCGTCCAAATGGACGGCGGTGGAGTGGACTCCGACGGCCGCCAATTCAAGAGCGCGGAGGAGATGTGGCGGGAAGCGGTGGGGGACGGCGACCCCCTCAAGAAATCGCAGTGGTATTCGCAGGGCGTCGGCTATTGGCAGGGTGTGGAGGCGACGGT...

Protein

3 records

下载 Protein FASTA

XP_057812216.1
MYHLLLHRTPIPIIPESRPPHKSSLSRVGMNQLNCVQMDGGGVDSDGRQFKSAEEMWREAVGDGDPLKKSQWYSQGVGYWQGVEATVDGVLGGYGHVNKPDIEGSEAFLNLILAERFPDAGSGRRLNTLDCGSGIGRVTKNLLIRYFNEVDLLEPVSHFLDTARENLSPENLMVTEDHKAVNFFCVPLQEFTPEAARYDIIWIQWCIGHLSDDDLMSFFDRAKGGLRPGGLFILKENIARNGFVLDNQDKSITRSDLYFK...

XP_057812217.1
MYHLLLHRTPIPIIPESRPPHKSSLSRVGMNQLNCVQMDGGGVDSDGRQFKSAEEMWREAVGDGDPLKKSQWYSQGVGYWQGVEATVDGVLGGYGHVNKPDIEGSEAFLNLILAERFPDAGSGRRLNTLDCGSGIGRVTKNLLIRYFNEVDLLEPVSHFLDTARENLSPENLMVTEDHKAVNFFCVPLQGGLRPGGLFILKENIARNGFVLDNQDKSITRSDLYFKQLFKQCGLHILKMKDQKGFPNELFAVKMYALTTD...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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