当前解析结果
SmilChr01G000171| 统一新 Gene ID | SmilChr01G000171 |
|---|---|
| 名称 | SmilChr01G000171 |
| 描述 | uncharacterized SmilChr01G000171 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 2814620 - 2815294 / - |
| NCBI Gene ID | LOC131019766 |
|---|---|
| GeneID | 131019766 |
| locus_tag | - |
| NCBI Name | LOC131019766 |
| 原始查询 | SmilChr01G000171 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os08g0225900; species=rice; confidence=low |
| 产物 | hit=Os08g0225900; species=rice; confidence=low |
| Arabidopsis | AT1G66235 (AT1G66235)no-apical-meristem-associated carboxy-terminal domain protein [Source:NCBI gene (formerly Entrezgene);Acc:842939] identity=24.3; qcov=0.679; evalue=2.53e-10; confidence=weak |
| Rice | Os08g0225900- identity=26.5; qcov=0.826; evalue=2.24e-12; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131019766 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057804641.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057804641.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057804641.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057804641.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057804641.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:2814621 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C3 |
Chr1:2814631 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr1:2814730 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B138,B71,C48 |
Chr1:2814732 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B109,B130,B50,C26,C65 |
Chr1:2814770 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | C46,C60 |
Chr1:2814770 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C46,C60 |
Chr1:2814771 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B99 |
Chr1:2814771 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr1:2814777 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C15,D10 |
Chr1:2814808 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B104,B76,D10,D11 |
Chr1:2814859 |
TC |
T |
1bp_deletion | frameshift_variant | 1 | B99 |
Chr1:2814859 |
TC |
T |
1bp_deletion | CDS_variant | 1 | B99 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。