Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G000219`

染色体: Chr01 坐标: 3854243-3858878 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G000219`
名称	SmilChr01G000219
描述	protein DEHYDRATION-INDUCED 19 homolog 7-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	3854243 - 3858878 / `-`

ID 对照

NCBI Gene ID	`LOC131007320`
GeneID	`131007320`
locus_tag	`-`
NCBI Name	`LOC131007320`
原始查询	`SmilChr01G000219`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	protein DEHYDRATION-INDUCED 19 homolog 7-like
产物	protein DEHYDRATION-INDUCED 19 homolog 7-like
Arabidopsis	`AT5G49230` (HRB1) Drought-responsive family protein [Source:NCBI gene (formerly Entrezgene);Acc:834983] identity=36.2; qcov=0.819; evalue=9.91e-36; confidence=medium
Rice	`Os05g0358000` (OsDi19-2) - identity=37.6; qcov=0.836; evalue=4.98e-31; confidence=medium
GO	-
KEGG	-
Pfam	PF05605 (zf-Di19); PF14571 (Di19_C)
InterPro	-
eggNOG	-
NR	GeneID:131007320

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057790440.1`
2	Cytoplasm	细胞质	0.60000	`XP_057790440.1`
3	Chromosome	染色体	0.00000	`XP_057790440.1`
4	Centromere	着丝粒	0.00000	`XP_057790440.1`
5	Chromatin	染色质	0.00000	`XP_057790440.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:3854741`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B124,B6,C67
`Chr1:3856996`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A10
`Chr1:3858249`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D1

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057790440.1

226 aa

113

226

zf-Di19

Di19_C

PF05605 zf-Di19 51-102 aa PF14571 Di19_C 125-222 aa

XP_057790441.1

226 aa

113

226

zf-Di19

Di19_C

PF05605 zf-Di19 51-102 aa PF14571 Di19_C 125-222 aa

XP_057790442.1

226 aa

113

226

zf-Di19

Di19_C

PF05605 zf-Di19 51-102 aa PF14571 Di19_C 125-222 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057790440.1`	Pfam	`PF05605`	zf-Di19	Domain	51	102	2.2e-18	66.9	Drought induced 19 protein (Di19), zinc-binding
`XP_057790440.1`	Pfam	`PF14571`	Di19_C	Family	125	222	4.3e-16	60.0	Stress-induced protein Di19, C-terminal
`XP_057790441.1`	Pfam	`PF05605`	zf-Di19	Domain	51	102	2.2e-18	66.9	Drought induced 19 protein (Di19), zinc-binding
`XP_057790441.1`	Pfam	`PF14571`	Di19_C	Family	125	222	4.3e-16	60.0	Stress-induced protein Di19, C-terminal
`XP_057790442.1`	Pfam	`PF05605`	zf-Di19	Domain	51	102	2.2e-18	66.9	Drought induced 19 protein (Di19), zinc-binding
`XP_057790442.1`	Pfam	`PF14571`	Di19_C	Family	125	222	4.3e-16	60.0	Stress-induced protein Di19, C-terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057934457.1
CCAAATAGAAAAAACATAATTTAAGAAGAAAAGGGCAAAAGATAACCCAGAAAGAGAGGTAGAGCCAGTCCTATATTTTCAAGAAATCCAAAATAAAAGTATTTCCTTTTGAAAAATTCATACAAAATTTTTACAATTTATCCCTAAACACATAATAAAATTGAAAAAAGAAAAGAAAAAGAGGAGTAAAAAAAATAGAAATAGAAATAGTAAAAAAGCGCATCCAGAAAAAAGTCGCAGCCGTTGATGAAATAACGCGG...

XM_057934459.1
GAGGTAGAGCCAGTCCTATATTTTCAAGAAATCCAAAATAAAAGTATTTCCTTTTGAAAAATTCATACAAAATTTTTACAATTTATCCCTAAACACATAATAAAATTGAAAAAAGAAAAGAAAAAGAGGAGTAAAAAAAATAGAAATAGAAATAGTAAAAAAGCGCATCCAGAAAAAAGTCGCAGCCGTTGATGAAATAACGCGGGAGTCGACGAGTATTTGGAAGCCGATCCGCGTCCACCACAATTAAAAAAATTTGT...

CDS

3 records

下载 CDS FASTA

LOC131007320
ATGGCCGATCGGTTTTACGATGATTTGGAGATTGCGCTGTCCTCTTATTCCATACCGAGCAACGATGATTATAATGAAGAGGACGAAGAGACCGAGGGAGAGTATGAGGGGGAAGAGGTCAACGATGTCGAAATTGAAGGAAAATCGGAGGAATTGGCGTGCCCTTTTTGCTCGGAGGATTTTGATGTTCTCGGGTTGTGCTGCCACATTGATGCCGACCACCGCATGGAGGTTAAGCCCGGGATTTGCCCTGTTTGTGC...

Protein

3 records

下载 Protein FASTA

XP_057790440.1
MADRFYDDLEIALSSYSIPSNDDYNEEDEETEGEYEGEEVNDVEIEGKSEELACPFCSEDFDVLGLCCHIDADHRMEVKPGICPVCAVKVRINMASHVITHHESILKALCNKKHRSTRSRSSIYLLRKELQEKHLRAVKESPSVGSSSDAAADSMLLSFVNSPQPAYRPQITEAVSLSEASLSGKSSYDDSAERFPPSLSTDRNNEMGRRSEFVQGLLLSTILDDL

XP_057790441.1
MADRFYDDLEIALSSYSIPSNDDYNEEDEETEGEYEGEEVNDVEIEGKSEELACPFCSEDFDVLGLCCHIDADHRMEVKPGICPVCAVKVRINMASHVITHHESILKALCNKKHRSTRSRSSIYLLRKELQEKHLRAVKESPSVGSSSDAAADSMLLSFVNSPQPAYRPQITEAVSLSEASLSGKSSYDDSAERFPPSLSTDRNNEMGRRSEFVQGLLLSTILDDL

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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