Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G000299`

染色体: Chr01 坐标: 5891486-5897014 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G000299`
名称	SmilChr01G000299
描述	CBL-interacting serine/threonine-protein kinase 3-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	5891486 - 5897014 / `+`

ID 对照

NCBI Gene ID	`LOC131016099`
GeneID	`131016099`
locus_tag	`-`
NCBI Name	`LOC131016099`
原始查询	`SmilChr01G000299`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	CBL-interacting serine/threonine-protein kinase 3-like
产物	CBL-interacting serine/threonine-protein kinase 3-like
Arabidopsis	`AT2G26980` (CIPK3) CBL-interacting protein kinase 3 [Source:NCBI gene (formerly Entrezgene);Acc:817240] identity=80.1; qcov=0.986; evalue=0; confidence=high
Rice	`Os03g0319400` (CK1) - identity=72.5; qcov=0.986; evalue=0; confidence=high
GO	GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0007165 (signal transduction)
KEGG	-
Pfam	PF00069 (Pkinase); PF03109 (ABC1); PF03822 (NAF); PF07714 (PK_Tyr_Ser-Thr); PF14531 (Kinase-like)
InterPro	-
eggNOG	-
NR	GeneID:131016099

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057800667.1`
2	Nucleus	细胞核	0.60000	`XP_057800667.1`
3	Cytoplasm	细胞质	0.60000	`XP_057800667.1`
4	Cell membrane	细胞膜	0.20000	`XP_057800667.1`
5	Chromosome	染色体	0.00000	`XP_057800667.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:5892821`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B46,D7
`Chr1:5894892`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C78
`Chr1:5894900`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C16
`Chr1:5895009`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A3,B103,C12,C31,D7
`Chr1:5895693`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:5895998`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B15,B56,B74,B96
`Chr1:5896650`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B11,C27,C41

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057800667.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800674.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800684.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800695.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800703.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800712.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800720.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800728.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800737.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800743.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

XP_057800744.1

439 aa

220

439

Pkinase

PK_Tyr_Ser-Thr

ABC1

Kinase-like

NAF

PF00069 Pkinase 13-268 aa PF07714 PK_Tyr_Ser-Thr 14-263 aa PF03109 ABC1 53-160 aa PF14531 Kinase-like 108-216 aa PF03822 NAF 308-367 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057800667.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800667.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800667.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800667.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800667.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800674.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800674.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800674.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800674.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800674.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800684.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800684.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800684.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800684.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800684.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800695.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800695.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800695.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800695.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800695.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800703.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800703.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800703.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800703.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800703.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800712.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800712.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800712.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800712.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800712.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800720.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800720.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800720.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800720.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800720.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800728.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800728.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800728.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800728.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800728.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800737.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800737.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800737.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800737.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800737.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800743.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800743.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800743.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800743.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800743.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain
`XP_057800744.1`	Pfam	`PF00069`	Pkinase	Domain	13	268	2.8e-74	250.5	Protein kinase domain
`XP_057800744.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	14	263	4.2e-38	131.8	Protein tyrosine and serine/threonine kinase
`XP_057800744.1`	Pfam	`PF03109`	ABC1	Domain	53	160	1.3e-06	28.5	ABC1 atypical kinase-like domain
`XP_057800744.1`	Pfam	`PF14531`	Kinase-like	Family	108	216	4.7e-08	33.4	Kinase-like
`XP_057800744.1`	Pfam	`PF03822`	NAF	Domain	308	367	3.6e-23	82.2	NAF domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

11 records

下载 cDNA FASTA

XM_057944684.1
CCAACTGTAAATAATGATGATTTTAGTGAAGAGGGTGGCGAGTCTTGAGTTTTCATGTTGATCTTTTCACGAGGCCTTTTCTCATTTGGGGGCCAGCCAGCAGCTCACATTCACAAAATCTTGAAAAAAAATTGAGCTTTATTTGACCCTTAAAGAAACCAAGAGCCACACTTCAGCTCCTCATTTGATCATATCATTGAGCTTCAATTCCATAAGTTTTGAGTTTATCCTCTTTCTCCACTTGCACCCTTTTAGTTTAT...

XM_057944737.1
TTTTAGTGAAGAGGGTGGCGAGTCTTGAGTTTTCATGTTGATCTTTTCACGAGGCCTTTTCTCATTTGGGGGCCAGCCAGCAGCTCACATTCACAAAATCTTGAAAAAAAATTGAGCTTTATTTGACCCTTAAAGAAACCAAGAGCCACACTTCAGCTCCTCATTTGATCATATCATTGAGCTTCAATTCCATAAGTTTTGAGTTTATCCTCTTTCTCCACTTGCACCCTTTTAGTTTATTGAGATTTTCTTGGATTATT...

CDS

11 records

下载 CDS FASTA

LOC131016099
ATGAATCAACCAAAAGTGAAGCGTATGATTGGGAAGTATGAGCTTGGGAGGACAATCGGGGAGGGTACGTTTGCGAAAGTGAAGTTCGCTAAAAATTCTGAAACGGGGCAGCCTGTGGCGATCAAGATTCTTGACAAAGATAAAGTTCTTAAGCACAAAATGGCTGAACAGATTAGGCGAGAGATTGCAACGATGAAGTTGATAAAACATCCTCATGTTGTTCAGCTATATGAGGTGATGGCAAGCAAGACCAAGATATT...

Protein

11 records

下载 Protein FASTA

XP_057800667.1
MNQPKVKRMIGKYELGRTIGEGTFAKVKFAKNSETGQPVAIKILDKDKVLKHKMAEQIRREIATMKLIKHPHVVQLYEVMASKTKIFIVLEFVTGGELFDKIVNHGRMREDEARKYFQQLIHVVDYCHSRGVFHRDLKPENLLLDASGNLKVSDFGLSALSQQVRDDGLLHTACGTPNYVAPEVLNDRGYNGANADLWSCGVILFVLLAGYLPFDDSNVVNLYKKISSAEFTCPPWLSFDAMKLIARILEPDPHKRIRIP...

XP_057800674.1
MNQPKVKRMIGKYELGRTIGEGTFAKVKFAKNSETGQPVAIKILDKDKVLKHKMAEQIRREIATMKLIKHPHVVQLYEVMASKTKIFIVLEFVTGGELFDKIVNHGRMREDEARKYFQQLIHVVDYCHSRGVFHRDLKPENLLLDASGNLKVSDFGLSALSQQVRDDGLLHTACGTPNYVAPEVLNDRGYNGANADLWSCGVILFVLLAGYLPFDDSNVVNLYKKISSAEFTCPPWLSFDAMKLIARILEPDPHKRIRIP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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