Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G000422`

染色体: Chr01 坐标: 8472285-8481306 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G000422`
名称	SmilChr01G000422
描述	auxilin-related protein 2-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	8472285 - 8481306 / `-`

ID 对照

NCBI Gene ID	`LOC131006500`
GeneID	`131006500`
locus_tag	`-`
NCBI Name	`LOC131006500`
原始查询	`SmilChr01G000422`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	auxilin-related protein 2-like
产物	auxilin-related protein 2-like
Arabidopsis	`AT4G12770` (AT4G12770) Chaperone DnaJ-domain superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:826889] identity=42.2; qcov=1.06; evalue=1.16e-147; confidence=medium
Rice	`Os11g0661200` (OsDjC78) - identity=66.5; qcov=0.238; evalue=5e-77; confidence=weak
GO	GO:0005737 (cytoplasm); GO:0030276 (clathrin binding); GO:0031982 (vesicle); GO:0043231 (intracellular membrane-bounded organelle); GO:0072318 (clathrin coat disassembly); GO:0072583 (clathrin-dependent endocytosis)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131006500

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	1.00000	`XP_057789630.1`
2	Trans-golgi network	Trans-golgi network	1.00000	`XP_057789630.1`
3	Nucleus membrane	核膜	0.20000	`XP_057789630.1`
4	Cytoplasmic vesicle	细胞质囊泡	0.20000	`XP_057789631.1`
5	Clathrin-coated vesicle	Clathrin-coated vesicle	0.20000	`XP_057789633.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:8476060`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A15
`Chr1:8477988`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C16
`Chr1:8478002`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B126,B9,C44
`Chr1:8478292`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B107,B37,B88
`Chr1:8478300`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B49,B50
`Chr1:8478359`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr1:8478412`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B16,B8,C22,C67
`Chr1:8478517`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C20,C87
`Chr1:8478551`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C20,C87
`Chr1:8478679`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B104,D11
`Chr1:8478974`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C6
`Chr1:8480160`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B104,D11

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057933649.1
TTTTGTGCATGGATGGTAGTAAAAATGGGTTAAAGATGGCAAAAGTGATAAAATTGAAGAGGACAAAACAAAAAGAAAAAAGAAAAAGAAAAGAGAAGAAGCGAAAAGAAGAAATAAGCAAAATTAGAACGCAGAGATATCTGATGCAGATGCAATAGTACAAACTACTCTGAGCAAAGACGCAAAATCTCAAGTGGAAAGCCAATCAATTTTCCGCTACGAAGCTGAAACAAGTTTGATTATCGCCATATGCAGAGGGA...

XM_057933647.1
TTTTGTGCATGGATGGTAGTAAAAATGGGTTAAAGATGGCAAAAGTGATAAAATTGAAGAGGACAAAACAAAAAGAAAAAAGAAAAAGAAAAGAGAAGAAGCGAAAAGAAGAAATAAGCAAAATTAGAACGCAGAGATATCTGATGCAGATGCAATAGTACAAACTACTCTGAGCAAAGACGCAAAATCTCAAGTGGAAAGCCAATCAATTTTCCGCTACGAAGCTGAAACAAGTTTGATTATCGCCATATGCAGAGGGA...

CDS

5 records

下载 CDS FASTA

LOC131006500
ATGGACGATCTGGACATCCTAGCCCGCGACTTCGGGTTTGGGCCCGGAGGGAAATCCAAACCGATGAGATCCGCGCAGTTCAGCGAGGTGTTTGGCGAGCCCGCCAAGTTCTCACCCAGCACAAATTATAGTACTAACACTCAACACTCTTCAATGGGGGACCTTGATTATGATTCCATGTTCAATCGGGAGGCGAATAGTGTTAACAATACTAGCAGCCGCAAAACGTCGTCGGCGTCGGCTCCTGTTTATGATGAGCC...

Protein

5 records

下载 Protein FASTA

XP_057789630.1
MDDLDILARDFGFGPGGKSKPMRSAQFSEVFGEPAKFSPSTNYSTNTQHSSMGDLDYDSMFNREANSVNNTSSRKTSSASAPVYDEPVYDDDIFKGLPGLKSNSPTSAVRSDSDVFTGISSHTSSKGGNQNHDFDDLLGNLGRSEQAKENIMSSSDRSKSNSTSKGFDDLLAGFGNGASAASNRPITESNSSSVPVGGSKHGSVLDETFLVSESVSTQGSSSSRVFPDPLEESSKHGKSRSTRAEASSGGGRGFDDSDTL...

XP_057789631.1
MDDLDILARDFGFGPGGKSKPMRSAQFSEVFGEPAKFSPSTNYSTNTQHSSMGDLDYDSMFNREANSVNNTSSRKTSSASAPVYDEPVYDDDIFKGLPGLKSNSPTSAVRSDSDVFTGISSHTSSKGGNQNHDFDDLLGNLGRSEQAKENIMSSSDRSKSNSTSKGFDDLLAGFGNGASAASNRPITESNSSSVPVGGSKHGSVLDETFLVSESVSTQGSSSSRVFPDPLEESSKHGKSRSTRAEASSGGGRGFDDSDTL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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