当前解析结果
SmilChr01G000886| 统一新 Gene ID | SmilChr01G000886 |
|---|---|
| 名称 | SmilChr01G000886 |
| 描述 | uncharacterized SmilChr01G000886 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 18926727 - 18927868 / + |
| NCBI Gene ID | LOC131006866 |
|---|---|
| GeneID | 131006866 |
| locus_tag | - |
| NCBI Name | LOC131006866 |
| 原始查询 | SmilChr01G000886 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | high chlorophyll fluorescence 153 [Source:NCBI gene (formerly Entrezgene);Acc:829283]; symbol=HCF153; hit=AT4G31560; species=arabidopsis; confidence=medium |
| 产物 | high chlorophyll fluorescence 153 [Source:NCBI gene (formerly Entrezgene);Acc:829283]; symbol=HCF153; hit=AT4G31560; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G31560 (HCF153)high chlorophyll fluorescence 153 [Source:NCBI gene (formerly Entrezgene);Acc:829283] identity=55; qcov=0.717; evalue=4.22e-28; confidence=medium |
| Rice | Os01g0940600- identity=42.2; qcov=0.803; evalue=2.06e-13; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006866 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057789999.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057789999.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 0.80000 | XP_057789999.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057789999.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057789999.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:18926879 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C80 |
Chr1:18926903 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B110,B8,B88,C22,C67 |
Chr1:18926926 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B110,B8,B88,C22,C67 |
Chr1:18926993 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B25,C80 |
Chr1:18927052 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C80 |
Chr1:18927587 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr1:18927614 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C80 |
Chr1:18927627 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B25,C80 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。