当前解析结果
SmilChr01G000981| 统一新 Gene ID | SmilChr01G000981 |
|---|---|
| 名称 | SmilChr01G000981 |
| 描述 | uncharacterized SmilChr01G000981 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 20789713 - 20791896 / + |
| NCBI Gene ID | LOC130995690 |
|---|---|
| GeneID | 130995690 |
| locus_tag | - |
| NCBI Name | LOC130995690 |
| 原始查询 | SmilChr01G000981 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | -- |
| Rice | Os12g0292200- identity=28.4; qcov=0.133; evalue=1.52e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130995690 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057777097.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057777097.1 |
| 3 | Nucleus | 细胞核 | 0.40000 | XP_057777097.1 |
| 4 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057777097.1 |
| 5 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.40000 | XP_057777097.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:20789728 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr1:20789730 |
TC |
T |
1bp_deletion | frameshift_variant | 4 | B127,B38,B91,C19 |
Chr1:20789730 |
TC |
T |
1bp_deletion | CDS_variant | 4 | B127,B38,B91,C19 |
Chr1:20789764 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr1:20789770 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B12 |
Chr1:20789802 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B126,B38,B39,B91,C19 |
Chr1:20789804 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B2,B25,B27,C48 |
Chr1:20789822 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B83 |
Chr1:20789832 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B119,B123,B53,B92,D9 |
Chr1:20789847 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B14,B47,C9,D3 |
Chr1:20789850 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B14,B47,C9,D3 |
Chr1:20789854 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C10,C48 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。