当前解析结果
SmilChr01G000998| 统一新 Gene ID | SmilChr01G000998 |
|---|---|
| 名称 | SmilChr01G000998 |
| 描述 | uncharacterized SmilChr01G000998 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 21016428 - 21018133 / + |
| NCBI Gene ID | LOC131006955 |
|---|---|
| GeneID | 131006955 |
| locus_tag | - |
| NCBI Name | LOC131006955 |
| 原始查询 | SmilChr01G000998 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | structural polyprotein [Source:NCBI gene (formerly Entrezgene);Acc:843335]; symbol=AT1G69980; hit=AT1G69980; species=arabidopsis; confidence=medium |
| 产物 | structural polyprotein [Source:NCBI gene (formerly Entrezgene);Acc:843335]; symbol=AT1G69980; hit=AT1G69980; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G69980 (AT1G69980)structural polyprotein [Source:NCBI gene (formerly Entrezgene);Acc:843335] identity=46.6; qcov=0.887; evalue=6.53e-31; confidence=medium |
| Rice | Os09g0560400- identity=44.3; qcov=0.813; evalue=8.64e-26; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131006955 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 0.60000 | XP_057790079.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.40000 | XP_057790080.1 |
| 3 | Vacuole | 液泡 | 0.40000 | XP_057790079.1 |
| 4 | Vacuole membrane | 液泡膜 | 0.40000 | XP_057790079.1 |
| 5 | Cell membrane | 细胞膜 | 0.20000 | XP_057790080.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:21017395 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C4 |
Chr1:21017400 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C14 |
Chr1:21017401 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C14 |
Chr1:21017440 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A6,B126,B33,C12 |
Chr1:21017444 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B107,B111 |
Chr1:21017498 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B64 |
Chr1:21017509 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C20,C87 |
Chr1:21017517 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B41,C20,C87 |
Chr1:21017615 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B81 |
Chr1:21017643 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B15,D1 |
Chr1:21017645 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:21018041 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B74 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。