当前解析结果
SmilChr01G001137| 统一新 Gene ID | SmilChr01G001137 |
|---|---|
| 名称 | SmilChr01G001137 |
| 描述 | uncharacterized SmilChr01G001137 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 23166033 - 23167776 / + |
| NCBI Gene ID | LOC131007057 |
|---|---|
| GeneID | 131007057 |
| locus_tag | - |
| NCBI Name | LOC131007057 |
| 原始查询 | SmilChr01G001137 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | interferon-activable protein [Source:NCBI gene (formerly Entrezgene);Acc:824374]; symbol=AT3G52110; hit=AT3G52110; species=arabidopsis; confidence=medium |
| 产物 | interferon-activable protein [Source:NCBI gene (formerly Entrezgene);Acc:824374]; symbol=AT3G52110; hit=AT3G52110; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G52110 (AT3G52110)interferon-activable protein [Source:NCBI gene (formerly Entrezgene);Acc:824374] identity=41.6; qcov=1.12; evalue=5.64e-67; confidence=medium |
| Rice | Os03g0174200- identity=33.5; qcov=1.29; evalue=1.47e-33; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007057 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790188.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057790188.1 |
| 3 | Cytoskeleton | 细胞骨架 | 0.20000 | XP_057790188.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057790188.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057790188.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:23166235 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B26,B30,B36,B58,C51 |
Chr1:23166335 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B61,B65 |
Chr1:23166858 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr1:23167088 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr1:23167091 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr1:23167249 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B100 |
Chr1:23167265 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A10,B129,C45 |
Chr1:23167555 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B15,B94,D1 |
Chr1:23167568 |
A |
AGT |
2bp_insertion | frameshift_variant | 3 | B15,B94,D1 |
Chr1:23167568 |
A |
AGT |
2bp_insertion | CDS_variant | 3 | B15,B94,D1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。