当前解析结果
SmilChr01G001184| 统一新 Gene ID | SmilChr01G001184 |
|---|---|
| 名称 | SmilChr01G001184 |
| 描述 | uncharacterized SmilChr01G001184 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 23932123 - 23933010 / - |
| NCBI Gene ID | LOC131003194 |
|---|---|
| GeneID | 131003194 |
| locus_tag | - |
| NCBI Name | LOC131003194 |
| 原始查询 | SmilChr01G001184 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=29.6; qcov=0.549; evalue=1.45e-21; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131003194 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057785686.1 |
| 2 | Cytosol | 细胞质基质 | 0.80000 | XP_057785686.1 |
| 3 | Chloroplast | 叶绿体 | 0.20000 | XP_057785686.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057785686.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057785686.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:23932173 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B46,C78 |
Chr1:23932179 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B125,B42,B43,C14,C43 |
Chr1:23932194 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B42 |
Chr1:23932204 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C14 |
Chr1:23932298 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B38,B39 |
Chr1:23932308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr1:23932349 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr1:23932389 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B79,C73 |
Chr1:23932453 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C23 |
Chr1:23932489 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B23 |
Chr1:23932518 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A3,B53,B69,B8 |
Chr1:23932526 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B12 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。