当前解析结果
SmilChr01G001195| 统一新 Gene ID | SmilChr01G001195 |
|---|---|
| 名称 | SmilChr01G001195 |
| 描述 | protein PATRONUS 2-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 24097390 - 24099837 / - |
| NCBI Gene ID | LOC131007107 |
|---|---|
| GeneID | 131007107 |
| locus_tag | - |
| NCBI Name | LOC131007107 |
| 原始查询 | SmilChr01G001195 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein PATRONUS 2-like |
| 产物 | protein PATRONUS 2-like |
| Arabidopsis | AT5G12360 (AT5G12360)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:831111] identity=33.2; qcov=1.05; evalue=5.99e-21; confidence=low |
| Rice | -- |
| GO | GO:0007346 (regulation of mitotic cell cycle) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007107 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790246.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057790246.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057790246.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057790246.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057790246.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:24097592 |
TA |
T |
1bp_deletion | frameshift_variant | 1 | A18 |
Chr1:24097592 |
TA |
T |
1bp_deletion | CDS_variant | 1 | A18 |
Chr1:24097600 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:24097603 |
CCT |
C |
2bp_deletion | frameshift_variant | 1 | C66 |
Chr1:24097603 |
CCT |
C |
2bp_deletion | CDS_variant | 1 | C66 |
Chr1:24097607 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C33,C46 |
Chr1:24097638 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B115,B20,B73,C36,C57 |
Chr1:24097881 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B125,B90,B92,D6 |
Chr1:24098458 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | A7 |
Chr1:24098458 |
TG |
T |
1bp_deletion | CDS_variant | 1 | A7 |
Chr1:24098460 |
CAT |
C |
2bp_deletion | frameshift_variant | 1 | A7 |
Chr1:24098460 |
CAT |
C |
2bp_deletion | CDS_variant | 1 | A7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。