当前解析结果
SmilChr01G001286| 统一新 Gene ID | SmilChr01G001286 |
|---|---|
| 名称 | SmilChr01G001286 |
| 描述 | uncharacterized SmilChr01G001286 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 25633562 - 25634590 / + |
| NCBI Gene ID | LOC131016740 |
|---|---|
| GeneID | 131016740 |
| locus_tag | - |
| NCBI Name | LOC131016740 |
| 原始查询 | SmilChr01G001286 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | maternal effect embryo arrest protein [Source:NCBI gene (formerly Entrezgene);Acc:819939]; symbol=AT3G07510; hit=AT3G07510; species=arabidopsis; confidence=medium |
| 产物 | maternal effect embryo arrest protein [Source:NCBI gene (formerly Entrezgene);Acc:819939]; symbol=AT3G07510; hit=AT3G07510; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G07510 (AT3G07510)maternal effect embryo arrest protein [Source:NCBI gene (formerly Entrezgene);Acc:819939] identity=50.9; qcov=0.724; evalue=2.96e-41; confidence=medium |
| Rice | Os10g0178200- identity=51.1; qcov=0.627; evalue=1.38e-39; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016740 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057801439.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057801439.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057801439.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057801439.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057801439.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:25633748 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A21,B104,D10 |
Chr1:25634122 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B8 |
Chr1:25634200 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B23 |
Chr1:25634276 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C35 |
Chr1:25634378 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B88 |
Chr1:25634495 |
C |
T |
EMS_canonical_SNV | stop_gained | 47 | A10,A19,A7,B101,B109,B117,B13,B130,B134,B17,B2,B24,B27,B31,B35,B4,B53,B58,B61,B67,B68,B69,B81,B85,B95,B96,C14,C17,C19,C20,C26,C28,C29,C3,C42,C48,C51,C62,C64,C66,C74,C75,C79,C87,D2,D3,D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。