当前解析结果
SmilChr01G001301| 统一新 Gene ID | SmilChr01G001301 |
|---|---|
| 名称 | SmilChr01G001301 |
| 描述 | uncharacterized SmilChr01G001301 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 25924720 - 25928691 / + |
| NCBI Gene ID | LOC131016858 |
|---|---|
| GeneID | 131016858 |
| locus_tag | - |
| NCBI Name | LOC131016858 |
| 原始查询 | SmilChr01G001301 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | octanoyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:831099]; symbol=AT5G12240; hit=AT5G12240; species=arabidopsis; confidence=medium |
| 产物 | octanoyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:831099]; symbol=AT5G12240; hit=AT5G12240; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G12240 (AT5G12240)octanoyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:831099] identity=49.1; qcov=1; evalue=1.43e-29; confidence=medium |
| Rice | Os07g0641800- identity=52.8; qcov=0.465; evalue=3.99e-13; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131016858 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057801627.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057801623.1 |
| 3 | Mitochondrion | 线粒体 | 0.20000 | XP_057801623.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057801627.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057801627.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:25925582 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C32,C68,D4 |
Chr1:25927851 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C13 |
Chr1:25928270 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B120,B15,B49,C76 |
Chr1:25928444 |
AG |
A |
1bp_deletion | frameshift_variant | 46 | A10,A14,A19,A21,A5,A8,A9,B10,B122,B13,B19,B23,B30,B35,B36,B4,B55,B57,B61,B68,B69,B8,B81,B89,B91,B93,B95,C1,C20,C25,C26,C3,C30,C36,C42,C44,C5,C57,C58,C63,C67,C70,C74,C87,D1,D6 |
Chr1:25928448 |
AAG |
A |
2bp_deletion | frameshift_variant | 46 | A10,A14,A19,A21,A5,A8,A9,B10,B122,B13,B19,B23,B30,B35,B36,B4,B55,B57,B61,B68,B69,B8,B81,B89,B91,B93,B95,C1,C20,C25,C26,C3,C30,C36,C42,C44,C5,C57,C58,C63,C67,C70,C74,C87,D1,D6 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。