当前解析结果
SmilChr01G001335| 统一新 Gene ID | SmilChr01G001335 |
|---|---|
| 名称 | SmilChr01G001335 |
| 描述 | uncharacterized SmilChr01G001335 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 26537828 - 26539671 / + |
| NCBI Gene ID | LOC131005266 |
|---|---|
| GeneID | 131005266 |
| locus_tag | - |
| NCBI Name | LOC131005266 |
| 原始查询 | SmilChr01G001335 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | -- |
| Rice | Os12g0292200- identity=28.4; qcov=0.199; evalue=5.12e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005266 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057788137.1 |
| 2 | Cytoplasmic granule | 细胞质颗粒 | 1.00000 | XP_057788137.1 |
| 3 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.60000 | XP_057788137.1 |
| 4 | Nucleus | 细胞核 | 0.40000 | XP_057788137.1 |
| 5 | P-body | P-body | 0.20000 | XP_057788137.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:26538229 |
C |
T |
EMS_canonical_SNV | stop_gained | 4 | A4,B128,B49,C63 |
Chr1:26538229 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A4,B128,B49,C63 |
Chr1:26538243 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C42,C75 |
Chr1:26538250 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A16,A4,B52,C68 |
Chr1:26538251 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C42 |
Chr1:26538273 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B27 |
Chr1:26538273 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B27 |
Chr1:26538283 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | B55 |
Chr1:26538283 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B55 |
Chr1:26538286 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | B135,D11 |
Chr1:26538286 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B135,D11 |
Chr1:26538291 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B3,C11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。