当前解析结果
SmilChr01G001464| 统一新 Gene ID | SmilChr01G001464 |
|---|---|
| 名称 | SmilChr01G001464 |
| 描述 | uncharacterized SmilChr01G001464 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 28438186 - 28440622 / - |
| NCBI Gene ID | LOC131018361 |
|---|---|
| GeneID | 131018361 |
| locus_tag | - |
| NCBI Name | LOC131018361 |
| 原始查询 | SmilChr01G001464 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os02g0753200; species=rice; confidence=high |
| 产物 | hit=Os02g0753200; species=rice; confidence=high |
| Arabidopsis | AT5G64160 (AT5G64160)plant/protein [Source:NCBI gene (formerly Entrezgene);Acc:836537] identity=53.2; qcov=0.943; evalue=9.51e-66; confidence=high |
| Rice | Os02g0753200- identity=48.7; qcov=1; evalue=1.63e-68; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131018361 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057803074.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057803074.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057803074.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057803074.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057803074.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:28438324 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D9 |
Chr1:28438465 |
TCG |
T |
2bp_deletion | frameshift_variant | 1 | C55 |
Chr1:28438465 |
TCG |
T |
2bp_deletion | CDS_variant | 1 | C55 |
Chr1:28438474 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B16,B3,B37,C24 |
Chr1:28438692 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B74,C18 |
Chr1:28440018 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B74,C18 |
Chr1:28440206 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A4,C19,C82 |
Chr1:28440216 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B53 |
Chr1:28440322 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B74,C18 |
Chr1:28440377 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C71,C9 |
Chr1:28440403 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。