当前解析结果
SmilChr01G001545| 统一新 Gene ID | SmilChr01G001545 |
|---|---|
| 名称 | SmilChr01G001545 |
| 描述 | glutathione S-transferase T3-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 29448734 - 29450543 / + |
| NCBI Gene ID | LOC131005921 |
|---|---|
| GeneID | 131005921 |
| locus_tag | - |
| NCBI Name | LOC131005921 |
| 原始查询 | SmilChr01G001545 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glutathione S-transferase T3-like |
| 产物 | glutathione S-transferase T3-like |
| Arabidopsis | AT5G41220 (GSTT3)glutathione S-transferase THETA 3 [Source:NCBI gene (formerly Entrezgene);Acc:834124] identity=27; qcov=0.621; evalue=5.12e-13; confidence=low |
| Rice | Os11g0303800- identity=28.1; qcov=0.946; evalue=2.72e-15; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131005921 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057789028.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057789028.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057789028.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057789028.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057789028.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:29448738 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B1,B101,B110,C1,C59 |
Chr1:29448771 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B1,B101 |
Chr1:29448836 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B112,C43 |
Chr1:29448886 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C51 |
Chr1:29449016 |
TG |
T |
1bp_deletion | frameshift_variant | 11 | B104,B112,B5,B57,B73,B98,C15,C19,C36,C43,D9 |
Chr1:29449100 |
G |
GC |
1bp_insertion | frameshift_variant | 1 | B126 |
Chr1:29449100 |
G |
GC |
1bp_insertion | CDS_variant | 1 | B126 |
Chr1:29449210 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A19,B111 |
Chr1:29449216 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B15 |
Chr1:29449218 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A19 |
Chr1:29449254 |
G |
A |
EMS_canonical_SNV | stop_gained | 3 | B83,C45,C60 |
Chr1:29449254 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B83,C45,C60 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。