Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G001937`

染色体: Chr01 坐标: 34573038-34574182 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G001937`
名称	SmilChr01G001937
描述	uncharacterized SmilChr01G001937
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	34573038 - 34574182 / `+`

ID 对照

NCBI Gene ID	`LOC131021944`
GeneID	`131021944`
locus_tag	`-`
NCBI Name	`LOC131021944`
原始查询	`SmilChr01G001937`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	FAM210B-like protein, putative (DUF1279) [Source:NCBI gene (formerly Entrezgene);Acc:817272]; symbol=AT2G27290; hit=AT2G27290; species=arabidopsis; confidence=high
产物	FAM210B-like protein, putative (DUF1279) [Source:NCBI gene (formerly Entrezgene);Acc:817272]; symbol=AT2G27290; hit=AT2G27290; species=arabidopsis; confidence=high
Arabidopsis	`AT2G27290` (AT2G27290) FAM210B-like protein, putative (DUF1279) [Source:NCBI gene (formerly Entrezgene);Acc:817272] identity=62.2; qcov=1.05; evalue=3.07e-61; confidence=high
Rice	`Os04g0416000` (OJ991214_12.13) - identity=68.2; qcov=0.824; evalue=8.59e-51; confidence=high
GO	GO:0005739 (mitochondrion)
KEGG	-
Pfam	PF06916 (FAM210A-B_dom)
InterPro	-
eggNOG	-
NR	GeneID:131021944

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057807275.1`
2	Chloroplast thylakoid	类囊体	1.00000	`XP_057807275.1`
3	Chloroplast thylakoid membrane	类囊体膜	1.00000	`XP_057807275.1`
4	Chloroplast membrane	叶绿体膜	0.40000	`XP_057807275.1`
5	Nucleus	细胞核	0.00000	`XP_057807275.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:34573191`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B53
`Chr1:34573193`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B128,C40,C45
`Chr1:34573199`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C40,C45
`Chr1:34573201`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B128
`Chr1:34573207`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C40,C45
`Chr1:34573210`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B123
`Chr1:34573211`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C40,C45
`Chr1:34573213`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B83,C53,C59
`Chr1:34573219`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B128,B16,C40,C45
`Chr1:34573223`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B128,B16,C40,C45
`Chr1:34573231`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B128,B16,C40,C45
`Chr1:34573232`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C40,C45

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057807275.1

211 aa

106

211

FAM210A-B_dom

PF06916 FAM210A-B_dom 92-198 aa

XP_057807276.1

187 aa

187

FAM210A-B_dom

PF06916 FAM210A-B_dom 92-174 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057807275.1`	Pfam	`PF06916`	FAM210A-B_dom	Domain	92	198	1.3e-23	84.0	FAM210A/B-like domain
`XP_057807276.1`	Pfam	`PF06916`	FAM210A-B_dom	Domain	92	174	5e-26	91.7	FAM210A/B-like domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057951293.1
AAAAAGTTGGGGTCGAAATTGCGAAACTTGTCACACTACAGATCTTGAAACTTCAATCATTGGTCCATCATCTCCACCACTAGAAATAGAAAATAAATAAATTACAATATTGAGATAAACAGTTGCTAAGCAATGGCCACAATTGTGCAAATTCCCGTTCAGCGCTTCAGTAGCAGAGCTCCATCCTCTCCCTCCAAAAATGGCGAAATCAGCAGATTTTTCAGCTCCGTTTCGAATTCGAAGTCTGCTCGCAGCAGATT...

XM_057951292.1
ACTACAGATCTTGAAACTTCAATCATTGGTCCATCATCTCCACCACTAGAAATAGAAAATAAATAAATTACAATATTGAGATAAACAGTTGCTAAGCAATGGCCACAATTGTGCAAATTCCCGTTCAGCGCTTCAGTAGCAGAGCTCCATCCTCTCCCTCCAAAAATGGCGAAATCAGCAGATTTTTCAGCTCCGTTTCGAATTCGAAGTCTGCTCGCAGCAGATTGAAGGTGAGAGCGGTGAAGGAGAAGATTGAGGAA...

CDS

2 records

下载 CDS FASTA

LOC131021944
ATGGCCACAATTGTGCAAATTCCCGTTCAGCGCTTCAGTAGCAGAGCTCCATCCTCTCCCTCCAAAAATGGCGAAATCAGCAGATTTTTCAGCTCCGTTTCGAATTCGAAGTCTGCTCGCAGCAGATTGAAGGTGAGAGCGGTGAAGGAGAAGATTGAGGAAATCAAGACCTCTTCATCTGCAGATGAAATCACCAAGAAATATGGGCTTGAAGTTGGTTTGTGGAAGATATTTTCGTCGAAAGAAGGAGGTGAGAAGAA...

Protein

2 records

下载 Protein FASTA

XP_057807275.1
MATIVQIPVQRFSSRAPSSPSKNGEISRFFSSVSNSKSARSRLKVRAVKEKIEEIKTSSSADEITKKYGLEVGLWKIFSSKEGGEKKSKGDEAKELLAKYGGAYLATSITLSLISFGLCYALINAGVDVAALLQKVLLVFENFVCGIFLFVCLIVEALQVGISADATGEKVGTFALAYAAHKAASPIRFPPTVALTPVVASWISKKVDGEK

XP_057807276.1
MATIVQIPVQRFSSRAPSSPSKNGEISRFFSSVSNSKSARSRLKVRAVKEKIEEIKTSSSADEITKKYGLEVGLWKIFSSKEGGEKKSKGDEAKELLAKYGGAYLATSITLSLISFGLCYALINAGVDVAALLQKVGISADATGEKVGTFALAYAAHKAASPIRFPPTVALTPVVASWISKKVDGEK

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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