当前解析结果
SmilChr01G002111| 统一新 Gene ID | SmilChr01G002111 |
|---|---|
| 名称 | SmilChr01G002111 |
| 描述 | uncharacterized SmilChr01G002111 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 37160280 - 37163308 / + |
| NCBI Gene ID | LOC131023484 |
|---|---|
| GeneID | 131023484 |
| locus_tag | - |
| NCBI Name | LOC131023484 |
| 原始查询 | SmilChr01G002111 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Arabidopsis/Rice homolog |
|---|---|
| 描述 | B-cell receptor-associated protein 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834924]; symbol=AT5G48660; hit=AT5G48660; species=arabidopsis; confidence=high |
| 产物 | B-cell receptor-associated protein 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834924]; symbol=AT5G48660; hit=AT5G48660; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G48660 (AT5G48660)B-cell receptor-associated protein 31-like protein [Source:NCBI gene (formerly Entrezgene);Acc:834924] identity=68.4; qcov=0.995; evalue=1.67e-79; confidence=high |
| Rice | Os03g0848400- identity=59.9; qcov=0.981; evalue=2.41e-77; confidence=high |
| GO | GO:0005783 (endoplasmic reticulum); GO:0005789 (endoplasmic reticulum membrane); GO:0006886 (intracellular protein transport); GO:0006888 (endoplasmic reticulum to Golgi vesicle-mediated transport); GO:0070973 (protein localization to endoplasmic reticulum exit site) |
| KEGG | smil04141 (Protein processing in endoplasmic reticulum - Salvia miltiorrhiza (redroot sage)) |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131023484 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057809013.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057809013.1 |
| 3 | Nucleus membrane | 核膜 | 0.40000 | XP_057809013.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057809013.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057809013.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:37161031 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B78,B8,C19 |
Chr1:37162625 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B23,B54,B82 |
Chr1:37162709 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:37162872 |
CAT |
C |
2bp_deletion | frameshift_variant | 2 | C21,C39 |
Chr1:37162872 |
CAT |
C |
2bp_deletion | CDS_variant | 2 | C21,C39 |
Chr1:37162920 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B125 |
Chr1:37162924 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B125 |
Chr1:37162926 |
C |
CT |
1bp_insertion | frameshift_variant | 5 | B129,B51,B89,C11,C69 |
Chr1:37162926 |
C |
CT |
1bp_insertion | CDS_variant | 5 | B129,B51,B89,C11,C69 |
Chr1:37162934 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B125,B92 |
Chr1:37162972 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B78,B8,C19 |
Chr1:37162978 |
GA |
G |
1bp_deletion | frameshift_variant | 6 | A25,B104,B35,B54,B66,D10 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。