当前解析结果
SmilChr01G002150| 统一新 Gene ID | SmilChr01G002150 |
|---|---|
| 名称 | SmilChr01G002150 |
| 描述 | glutathione S-transferase T2-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 37491074 - 37491916 / + |
| NCBI Gene ID | LOC131007642 |
|---|---|
| GeneID | 131007642 |
| locus_tag | - |
| NCBI Name | LOC131007642 |
| 原始查询 | SmilChr01G002150 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glutathione S-transferase T2-like |
| 产物 | glutathione S-transferase T2-like |
| Arabidopsis | AT3G47680 (AT3G47680)DNA binding protein [Source:NCBI gene (formerly Entrezgene);Acc:823922] identity=28.3; qcov=0.404; evalue=8.21e-11; confidence=low |
| Rice | Os09g0241700- identity=26.3; qcov=0.489; evalue=1.69e-08; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007642 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790544.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057790544.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057790544.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057790544.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057790544.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:37491092 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C18,C75 |
Chr1:37491104 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C18,C75 |
Chr1:37491207 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B126 |
Chr1:37491239 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A21,C15 |
Chr1:37491265 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B4 |
Chr1:37491276 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A19,B86 |
Chr1:37491284 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A19,B86 |
Chr1:37491302 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | B105,B45 |
Chr1:37491302 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B105,B45 |
Chr1:37491339 |
TG |
T |
1bp_deletion | frameshift_variant | 1 | B104 |
Chr1:37491339 |
TG |
T |
1bp_deletion | CDS_variant | 1 | B104 |
Chr1:37491341 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B114,B81,C21,C7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。