当前解析结果
SmilChr01G002153| 统一新 Gene ID | SmilChr01G002153 |
|---|---|
| 名称 | SmilChr01G002153 |
| 描述 | uncharacterized SmilChr01G002153 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 37529358 - 37530554 / - |
| NCBI Gene ID | LOC131007666 |
|---|---|
| GeneID | 131007666 |
| locus_tag | - |
| NCBI Name | LOC131007666 |
| 原始查询 | SmilChr01G002153 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669]; symbol=MUG3; hit=AT1G06740; species=arabidopsis; confidence=low |
| 产物 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669]; symbol=MUG3; hit=AT1G06740; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G06740 (MUG3)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669] identity=31.5; qcov=0.51; evalue=2.55e-20; confidence=low |
| Rice | Os12g0597300- identity=31.6; qcov=0.525; evalue=6.07e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007666 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790579.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057790579.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057790579.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057790579.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057790579.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:37530167 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B24 |
Chr1:37530215 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | C63 |
Chr1:37530215 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C63 |
Chr1:37530257 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C63 |
Chr1:37530271 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr1:37530407 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C16 |
Chr1:37530448 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。