当前解析结果
SmilChr01G002250| 统一新 Gene ID | SmilChr01G002250 |
|---|---|
| 名称 | SmilChr01G002250 |
| 描述 | glutathione S-transferase T3-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 39124182 - 39124853 / - |
| NCBI Gene ID | LOC131007961 |
|---|---|
| GeneID | 131007961 |
| locus_tag | - |
| NCBI Name | LOC131007961 |
| 原始查询 | SmilChr01G002250 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glutathione S-transferase T3-like |
| 产物 | glutathione S-transferase T3-like |
| Arabidopsis | AT5G41220 (GSTT3)glutathione S-transferase THETA 3 [Source:NCBI gene (formerly Entrezgene);Acc:834124] identity=26; qcov=0.691; evalue=1.09e-13; confidence=low |
| Rice | Os08g0225900- identity=28.2; qcov=0.762; evalue=1.76e-14; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131007961 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057790855.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057790855.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057790855.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057790855.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057790855.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:39124205 |
G |
A |
EMS_canonical_SNV | stop_gained | 5 | B23,B88,C11,C69,D8 |
Chr1:39124205 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B23,B88,C11,C69,D8 |
Chr1:39124208 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D4 |
Chr1:39124226 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B48,C26 |
Chr1:39124240 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B54,C47,C59 |
Chr1:39124269 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr1:39124294 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A4,B54,C47 |
Chr1:39124299 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B71,C13 |
Chr1:39124303 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B85,C45 |
Chr1:39124322 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A19,B55,B79 |
Chr1:39124326 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B55 |
Chr1:39124332 |
C |
T |
EMS_canonical_SNV | stop_gained | 8 | A4,B128,B36,B88,B97,C35,C4,C74 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。