当前解析结果
SmilChr01G002380| 统一新 Gene ID | SmilChr01G002380 |
|---|---|
| 名称 | SmilChr01G002380 |
| 描述 | uncharacterized SmilChr01G002380 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 41002459 - 41005081 / + |
| NCBI Gene ID | LOC131024933 |
|---|---|
| GeneID | 131024933 |
| locus_tag | - |
| NCBI Name | LOC131024933 |
| 原始查询 | SmilChr01G002380 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808]; symbol=ASG7; hit=AT5G47580; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808]; symbol=ASG7; hit=AT5G47580; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G47580 (ASG7)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834808] identity=51.6; qcov=0.979; evalue=0; confidence=high |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131024933 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.80000 | XP_057810479.1 |
| 2 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057810479.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057810479.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057810479.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057810479.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:41002684 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B115,B119,B34 |
Chr1:41002764 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr1:41003148 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr1:41003286 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B22,B41 |
Chr1:41003346 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B108,B56,B93,B96,C23 |
Chr1:41003416 |
GC |
G |
1bp_deletion | frameshift_variant | 1 | B91 |
Chr1:41003416 |
GC |
G |
1bp_deletion | CDS_variant | 1 | B91 |
Chr1:41003719 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B104,B29,B97,C38,C73 |
Chr1:41003787 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C11,C69 |
Chr1:41003805 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B13,B15,C76,D11 |
Chr1:41004207 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A23,B6,B82,C34,D9 |
Chr1:41004395 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C52 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。