当前解析结果
SmilChr01G002424| 统一新 Gene ID | SmilChr01G002424 |
|---|---|
| 名称 | SmilChr01G002424 |
| 描述 | uncharacterized SmilChr01G002424 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 41745535 - 41746849 / + |
| NCBI Gene ID | LOC131025244 |
|---|---|
| GeneID | 131025244 |
| locus_tag | - |
| NCBI Name | LOC131025244 |
| 原始查询 | SmilChr01G002424 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | sulfated surface-like glycoprotein [Source:NCBI gene (formerly Entrezgene);Acc:842549]; symbol=AT1G62520; hit=AT1G62520; species=arabidopsis; confidence=high |
| 产物 | sulfated surface-like glycoprotein [Source:NCBI gene (formerly Entrezgene);Acc:842549]; symbol=AT1G62520; hit=AT1G62520; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G62520 (AT1G62520)sulfated surface-like glycoprotein [Source:NCBI gene (formerly Entrezgene);Acc:842549] identity=51.3; qcov=1.02; evalue=9.21e-87; confidence=high |
| Rice | Os02g0661600- identity=39.9; qcov=0.71; evalue=1.03e-31; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131025244 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057810899.1 |
| 2 | Cytosol | 细胞质基质 | 0.20000 | XP_057810899.1 |
| 3 | Cell membrane | 细胞膜 | 0.20000 | XP_057810899.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057810899.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057810899.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:41745787 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr1:41745838 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A9,B126,B65 |
Chr1:41745850 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B44,C18,C3 |
Chr1:41745903 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A9,B61,B65 |
Chr1:41746040 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A16,B41,B69 |
Chr1:41746156 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A3,B113,B62,D3 |
Chr1:41746285 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | C12,C14,C47,C74 |
Chr1:41746393 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B101,B87 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。