当前解析结果
SmilChr01G002456| 统一新 Gene ID | SmilChr01G002456 |
|---|---|
| 名称 | SmilChr01G002456 |
| 描述 | uncharacterized protein At2g29880-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 42184695 - 42185389 / - |
| NCBI Gene ID | LOC131008278 |
|---|---|
| GeneID | 131008278 |
| locus_tag | - |
| NCBI Name | LOC131008278 |
| 原始查询 | SmilChr01G002456 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Myb/SANT-like DNA-binding domain protein [Source:NCBI gene (formerly Entrezgene);Acc:832784]; symbol=AT5G27260; hit=AT5G27260; species=arabidopsis; confidence=low |
| 产物 | Myb/SANT-like DNA-binding domain protein [Source:NCBI gene (formerly Entrezgene);Acc:832784]; symbol=AT5G27260; hit=AT5G27260; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G27260 (AT5G27260)Myb/SANT-like DNA-binding domain protein [Source:NCBI gene (formerly Entrezgene);Acc:832784] identity=40.4; qcov=0.566; evalue=3.7e-15; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008278 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057791150.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057791150.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057791150.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057791150.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057791150.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:42184776 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B21,C2 |
Chr1:42184808 |
CT |
C |
1bp_deletion | frameshift_variant | 1 | C53 |
Chr1:42184808 |
CT |
C |
1bp_deletion | CDS_variant | 1 | C53 |
Chr1:42184882 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B2,B24,B76 |
Chr1:42184892 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B25,B87,C55 |
Chr1:42184894 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B32,C65 |
Chr1:42184900 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B80,C38,C60,D4 |
Chr1:42184972 |
GA |
G |
1bp_deletion | frameshift_variant | 1 | B25 |
Chr1:42184972 |
GA |
G |
1bp_deletion | CDS_variant | 1 | B25 |
Chr1:42185150 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | B57 |
Chr1:42185150 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B57 |
Chr1:42185273 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。