Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID,以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因,再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr01G002594

染色体: Chr01 坐标: 44074792-44079642 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr01G002594
名称SmilChr01G002594
描述lysophospholipid acyltransferase 1-like
染色体 / SeqIDChr01 / NC_080387.1
坐标与链方向44074792 - 44079642 / +

ID 对照

NCBI Gene IDLOC131026527
GeneID131026527
locus_tag-
NCBI NameLOC131026527
原始查询SmilChr01G002594

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述lysophospholipid acyltransferase 1-like
产物lysophospholipid acyltransferase 1-like
ArabidopsisAT1G12640 (LPLAT1)
MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:837820]
identity=79.5; qcov=0.924; evalue=7.97e-107; confidence=high
RiceOs02g0676000
-
identity=73.3; qcov=0.924; evalue=9.68e-104; confidence=high
GOGO:0005783 (endoplasmic reticulum); GO:0008654 (phospholipid biosynthetic process); GO:0016020 (membrane); GO:0016746 (acyltransferase activity); GO:0019432 (triglyceride biosynthetic process); GO:0030258 (lipid modification)
KEGG-
PfamPF03062 (MBOAT)
InterPro-
eggNOG-
NRGeneID:131026527

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Endoplasmic reticulum 内质网 1.00000 XP_057812393.1
2 Endoplasmic reticulum membrane 内质网膜 0.80000 XP_057812393.1
3 Mitochondrion membrane 线粒体膜 0.20000 XP_057812393.1
4 Nucleus 细胞核 0.00000 XP_057812393.1
5 Chromosome 染色体 0.00000 XP_057812393.1

进入亚细胞定位查询

EMS 诱变突变

该基因暂未检索到已上线的精选 EMS CDS / LoF 突变,或 EMS 突变库仍在构建。

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。

XP_057812393.1
211 aa
N
1
106
211
MBOAT
C
PF03062 MBOAT 1-192 aa
XP_057812402.1
211 aa
N
1
106
211
MBOAT
C
PF03062 MBOAT 1-192 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057812393.1 Pfam PF03062 MBOAT Family 1 192 6.2e-31 108.6 MBOAT, membrane-bound O-acyltransferase family
XP_057812402.1 Pfam PF03062 MBOAT Family 1 192 6.2e-31 108.6 MBOAT, membrane-bound O-acyltransferase family

cDNA / CDS / Protein 序列

下载基因组 DNA(仅基因区域)

每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA
XM_057956419.1
TTTGTGGAGTCTGGAGACATCAGTAACTGTGGTTCTGACTTCTGAGATCATGTTAAATCTATTTTCCTTATCCACGATTTTACTCAATGTTCATTGTTTTTAGGAAATCCAAGACATAGCTGAACTCATGCACTGATTTGAAGAGTGCAGAGCCATCACCTTTGACTGATAATTGTAGCCATCTTGTTTGGGTTTAGAAATAAAAGAGGGGAGGGGCATCTCTCTATTTAGTGGTTCTATATGCCCTTAAAAAGTGACAT...
XM_057956410.1
TTTGTGGAGTCTGGAGACATCAGTAACTGTGGTTCTGACTTCTGAGATCATGTTAAATCTATTTTCCTTATCCACGATTTTACTCAATGTTCATTGTTTTTAGGAAATCCAAGACATAGCTGAACTCATGCACTGATTTGAAGAGTGCAGAGCCATCACCTTTGACTGATAATTGTAGCCATCTTGTTTGGGTTTAGAAATAAAAGAGGGGAGGGGCATCTCTCTATTTAGTGGTTCTATATGCCCTTAAAAAGTGACAT...

CDS

2 records

下载 CDS FASTA
LOC131026527
ATGGTGATAACTCTGAAAATTATATCATGTGTCATAAACTATAATGATGGAATTCTCAAAGAGGATGATCTACGTGAAGCACAAAAGAAAAATTGGTTGCTGAAGATGCCATCATTACTGGAGTACTTTGGGTTCTGTCTATGTTGTGGAAGTCACTTTGCCGGTCCTGTTTATGAAATGAAAGACTATATTGAATGGACAGAGAGGAAAGGGATCTGGCAACCTTCGGCCAAGGGACAGTCCCCCTCTCCTTATTGGGC...
LOC131026527
ATGGTGATAACTCTGAAAATTATATCATGTGTCATAAACTATAATGATGGAATTCTCAAAGAGGATGATCTACGTGAAGCACAAAAGAAAAATTGGTTGCTGAAGATGCCATCATTACTGGAGTACTTTGGGTTCTGTCTATGTTGTGGAAGTCACTTTGCCGGTCCTGTTTATGAAATGAAAGACTATATTGAATGGACAGAGAGGAAAGGGATCTGGCAACCTTCGGCCAAGGGACAGTCCCCCTCTCCTTATTGGGC...

Protein

2 records

下载 Protein FASTA
XP_057812393.1
MVITLKIISCVINYNDGILKEDDLREAQKKNWLLKMPSLLEYFGFCLCCGSHFAGPVYEMKDYIEWTERKGIWQPSAKGQSPSPYWATLRALLQSAICMGLYLYLVPQFPLSRFTEPVYQEYGFFKKLSYQYMSGFTARWKYYFIWSISEASTIISGLGFSGWTDSNPPKPKWDRAINVDILGLELAKSAVQIPVYHLCGIFKSAPGLGTV
XP_057812402.1
MVITLKIISCVINYNDGILKEDDLREAQKKNWLLKMPSLLEYFGFCLCCGSHFAGPVYEMKDYIEWTERKGIWQPSAKGQSPSPYWATLRALLQSAICMGLYLYLVPQFPLSRFTEPVYQEYGFFKKLSYQYMSGFTARWKYYFIWSISEASTIISGLGFSGWTDSNPPKPKWDRAINVDILGLELAKSAVQIPVYHLCGIFKSAPGLGTV

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。

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