Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G002704`

染色体: Chr01 坐标: 45312833-45315855 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G002704`
名称	SmilChr01G002704
描述	glutathione hydrolase 3-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	45312833 - 45315855 / `-`

ID 对照

NCBI Gene ID	`LOC130986013`
GeneID	`130986013`
locus_tag	`-`
NCBI Name	`LOC130986013`
原始查询	`SmilChr01G002704`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glutathione hydrolase 3-like
产物	glutathione hydrolase 3-like
Arabidopsis	`AT4G29210` (GGT4) gamma-glutamyl transpeptidase 4 [Source:NCBI gene (formerly Entrezgene);Acc:829042] identity=62.5; qcov=1.01; evalue=0; confidence=high
Rice	`Os04g0457500` - identity=53.6; qcov=0.994; evalue=0; confidence=high
GO	GO:0005886 (plasma membrane); GO:0006751 (glutathione catabolic process); GO:0036374 (glutathione gamma-glutamate hydrolase)
KEGG	smil00430 (Taurine and hypotaurine metabolism - Salvia miltiorrhiza (redroot sage)); smil00460 (Cyanoamino acid metabolism - Salvia miltiorrhiza (redroot sage)); smil00480 (Glutathione metabolism - Salvia miltiorrhiza (redroot sage)); smil00590 (Arachidonic acid metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage))
Pfam	PF01019 (G_glu_transpept)
InterPro	-
eggNOG	-
NR	GeneID:130986013

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	0.60000	`XP_057765259.1`
2	Endoplasmic reticulum	内质网	0.60000	`XP_057765268.1`
3	Golgi apparatus	高尔基体	0.40000	`XP_057765259.1`
4	Secreted	分泌到胞外	0.40000	`XP_057765268.1`
5	Lysosome	溶酶体	0.20000	`XP_057765268.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:45312980`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C61
`Chr1:45312986`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C61
`Chr1:45313059`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B106,B17,C30
`Chr1:45313142`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B106,B17,C30
`Chr1:45313444`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C61
`Chr1:45313580`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B101
`Chr1:45313790`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B26
`Chr1:45313957`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C37
`Chr1:45314001`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B101,C55
`Chr1:45314068`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B28
`Chr1:45314366`	`AC`	`A`	1bp_deletion	frameshift_variant	1	C20
`Chr1:45314366`	`AC`	`A`	1bp_deletion	CDS_variant	1	C20

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057765259.1

625 aa

312

625

G_glu_transpept

PF01019 G_glu_transpept 86-623 aa

XP_057765268.1

533 aa

266

533

G_glu_transpept

PF01019 G_glu_transpept 1-531 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057765259.1`	Pfam	`PF01019`	G_glu_transpept	Domain	86	623	1.2e-177	592.6	Gamma-glutamyltranspeptidase
`XP_057765268.1`	Pfam	`PF01019`	G_glu_transpept	Domain	1	531	5.7e-174	580.5	Gamma-glutamyltranspeptidase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057909276.1
AAAAACTAAAATAGAATTCTTTTTTGTGAAAGAAAAAAGATACTAATTATTTTTGGTGAACACATGGAGTATAACTAAAACATACTGACGAAAAGAGTCCCTTAGTTTTGGACGATCATGATTCTAGATGAAAGATACTGACCATTAATGGTTGAAATTTGAGTTTCATCCTCTGTTTTAATTACTCATGTTCACCAACCCTACGTAATAGCACCTTGGGCCAACAGTCGTCACTCAAAACTGTGTGTTTCTTTAGAGAG...

XM_057909285.1
GAGTATAACTAAAACATACTGACGAAAAGAGTCCCTTAGTTTTGGACGATCATGATTCTAGATGAAAGATACTGACCATTAATGGTTGAAATTTGAGTTTCATCCTCTGTTTTAATTACTCATGTTCACCAACCCTACGTAATAGCACCTTGGGCCAACAGTCGTCACTCAAAACTGTGTGTTTCTTTAGAGAGAGAGAGAGAGAGAGATGGGGGGAGATGAGCAATTCGAGTCTGCTTCTCTACTGCTTAGTGATGATG...

CDS

2 records

下载 CDS FASTA

LOC130986013
ATGGGGGGAGATGAGCAATTCGAGTCTGCTTCTCTACTGCTTAGTGATGATGGGAGCAGGAAGACCAGGAGAAGGAGCACACTTCTCTGCTTTATATTTCTTGCTTTCTCAGCCACAACCATAGCATTTTTTAGTGTAAGAGGGCATTACGTTGACTTGAGGTTTTTGGGGGCAAGTGATGATCATAAGCATCCGATTAGAAACAACGACGTTGTAGTGTCAGAGGCAGCAGTAGTTGCAGCTGATGATGGGCGTTGCTC...

LOC130986013
ATGCTTGAAAAAGGCGGCCACGCCGTTGATGCTGCTGTTGCTACTGCATTGTGCCTCGGAGTTGTTGGCCCCATGTCTAGTGGGATCGGAGGCGGAGCTTTCATGCTGGTTCGCTCCTCATCCGCGCCCGGTGCACTTGCAATCGACATGAGGGAAACTGCTCCAGCAGCTGCTTCGGAGAACATGTATGAGAGCAATGTAGAAGCTAAAGTTCTAGGTGCATTGGCAATGGGCACCCCCGGTGAGATAGCCGGGCTTCA...

Protein

2 records

下载 Protein FASTA

XP_057765259.1
MGGDEQFESASLLLSDDGSRKTRRRSTLLCFIFLAFSATTIAFFSVRGHYVDLRFLGASDDHKHPIRNNDVVVSEAAVVAADDGRCSEIGVSMLEKGGHAVDAAVATALCLGVVGPMSSGIGGGAFMLVRSSSAPGALAIDMRETAPAAASENMYESNVEAKVLGALAMGTPGEIAGLHAAWLSYGRLPWKALFEPAIKLARDGFVVSPCLGEKIAGQEEKIMADPGLTRVFAPNATLLKYGDTCYNVELGNTLQAIAEE...

XP_057765268.1
MLEKGGHAVDAAVATALCLGVVGPMSSGIGGGAFMLVRSSSAPGALAIDMRETAPAAASENMYESNVEAKVLGALAMGTPGEIAGLHAAWLSYGRLPWKALFEPAIKLARDGFVVSPCLGEKIAGQEEKIMADPGLTRVFAPNATLLKYGDTCYNVELGNTLQAIAEEGPGALYNGSIGERLIEDVREAGGILTMEDLRNYRARVTAAVEADALGYKILGMPPPSSGTVGLALVLNIFESYGNRDAAQGPLGLHRLIEAL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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