当前解析结果
SmilChr01G002719| 统一新 Gene ID | SmilChr01G002719 |
|---|---|
| 名称 | SmilChr01G002719 |
| 描述 | uncharacterized SmilChr01G002719 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 45469139 - 45471381 / + |
| NCBI Gene ID | LOC131008766 |
|---|---|
| GeneID | 131008766 |
| locus_tag | - |
| NCBI Name | LOC131008766 |
| 原始查询 | SmilChr01G002719 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0597300; species=rice; confidence=low |
| 产物 | hit=Os12g0597300; species=rice; confidence=low |
| Arabidopsis | AT3G05850 (MUG7)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859] identity=26.1; qcov=0.653; evalue=7.88e-37; confidence=low |
| Rice | Os12g0597300- identity=29; qcov=0.653; evalue=4.87e-43; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008766 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057791782.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057791782.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057791782.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057791782.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057791782.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:45469153 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B75,B87 |
Chr1:45469203 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B29 |
Chr1:45469245 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B121,B29,B7,C31,C38 |
Chr1:45469254 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B7,C38 |
Chr1:45469269 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B7,C38 |
Chr1:45469279 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C38 |
Chr1:45469536 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B74,B82,C24 |
Chr1:45469552 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B96 |
Chr1:45469567 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B30,B65,D3 |
Chr1:45469571 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B138,B20,B88,C70,D4 |
Chr1:45469580 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C52,C68 |
Chr1:45469583 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A21,A23,D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。