Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G002777`

染色体: Chr01 坐标: 46205267-46209664 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G002777`
名称	SmilChr01G002777
描述	uncharacterized SmilChr01G002777
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	46205267 - 46209664 / `-`

ID 对照

NCBI Gene ID	`LOC130986677`
GeneID	`130986677`
locus_tag	`-`
NCBI Name	`LOC130986677`
原始查询	`SmilChr01G002777`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Transmembrane Fragile-X-F-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:838427]; symbol=AT1G18470; hit=AT1G18470; species=arabidopsis; confidence=medium
产物	Transmembrane Fragile-X-F-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:838427]; symbol=AT1G18470; hit=AT1G18470; species=arabidopsis; confidence=medium
Arabidopsis	`AT1G18470` (AT1G18470) Transmembrane Fragile-X-F-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:838427] identity=74.3; qcov=0.849; evalue=1.33e-49; confidence=medium
Rice	`Os03g0706900` (OsRHC1) - identity=69.3; qcov=0.849; evalue=2.89e-48; confidence=medium
GO	-
KEGG	-
Pfam	PF10269 (Tmemb_185A)
InterPro	-
eggNOG	-
NR	GeneID:130986677

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	0.80000	`XP_057766133.1`
2	Nucleus	细胞核	0.60000	`XP_057766133.1`
3	Chromosome	染色体	0.00000	`XP_057766133.1`
4	Centromere	着丝粒	0.00000	`XP_057766133.1`
5	Chromatin	染色质	0.00000	`XP_057766133.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:46205867`	`ATG`	`A`	2bp_deletion	frameshift_variant	162	A1,A10,A11,A15,A16,A19,A20,A23,A3,A5,A6,A7,A8,A9,B1,B10,B100,B101,B106,B107,B108,B109,B111,B115,B118,B119,B120,B121,B122,B123,B129,B130,B132,B133,B134,B135,B136,B137,B14,B15,B19,B2,B21,B22,B23,B24,B25,B26,B28,B29,B30,B31,B32,B36,B38,B4,B42,B43,B44,B45,B47,B5,B50,B51,B53,B55,B57,B59,B6,B61,B62,B63,B64,B69,B7,B70,B71,B72,B73,B74,B76,B79,B8,B81,B82,B83,B84,B86,B88,B89,B9,B90,B91,B92,B95,B97,B98,B99,C1,C11,C12,C13,C15,C17,C19,C20,C21,C22,C24,C25,C29,C3,C30,C31,C32,C34,C35,C36,C37,C39,C4,C40,C43,C46,C47,C48,C51,C52,C53,C54,C55,C56,C57,C58,C59,C60,C61,C63,C64,C65,C67,C68,C69,C7,C72,C75,C77,C79,C81,C82,C83,C84,C85,C87,D1,D10,D11,D3,D5,D6,D8,D9
`Chr1:46205872`	`G`	`GAC`	2bp_insertion	frameshift_variant	162	A1,A10,A11,A15,A16,A19,A20,A23,A3,A5,A6,A7,A8,A9,B1,B10,B100,B101,B106,B107,B108,B109,B111,B115,B118,B119,B120,B121,B122,B123,B129,B130,B132,B133,B134,B135,B136,B137,B14,B15,B19,B2,B21,B22,B23,B24,B25,B26,B28,B29,B30,B31,B32,B36,B38,B4,B42,B43,B44,B45,B47,B5,B50,B51,B53,B55,B57,B59,B6,B61,B62,B63,B64,B69,B7,B70,B71,B72,B73,B74,B76,B79,B8,B81,B82,B83,B84,B86,B88,B89,B9,B90,B91,B92,B95,B97,B98,B99,C1,C11,C12,C13,C15,C17,C19,C20,C21,C22,C24,C25,C29,C3,C30,C31,C32,C34,C35,C36,C37,C39,C4,C40,C43,C46,C47,C48,C51,C52,C53,C54,C55,C56,C57,C58,C59,C60,C61,C63,C64,C65,C67,C68,C69,C7,C72,C75,C77,C79,C81,C82,C83,C84,C85,C87,D1,D10,D11,D3,D5,D6,D8,D9
`Chr1:46206124`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A18,B108,C23
`Chr1:46206154`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B100,B110,B140,D7
`Chr1:46206195`	`AT`	`A`	1bp_deletion	frameshift_variant	15	A7,B114,B16,B29,B40,B42,B43,B78,C35,C44,C64,C66,C81,C9,D8
`Chr1:46206247`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B100,B140,D7
`Chr1:46206256`	`AC`	`A`	1bp_deletion	frameshift_variant	1	B92
`Chr1:46206256`	`AC`	`A`	1bp_deletion	CDS_variant	1	B92
`Chr1:46206268`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C83
`Chr1:46206290`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A18,B24,C65

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057766133.1

125 aa

125

Tmemb_185A