当前解析结果
SmilChr01G002799| 统一新 Gene ID | SmilChr01G002799 |
|---|---|
| 名称 | SmilChr01G002799 |
| 描述 | uncharacterized SmilChr01G002799 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 46479327 - 46490497 / + |
| NCBI Gene ID | LOC130986986 |
|---|---|
| GeneID | 130986986 |
| locus_tag | - |
| NCBI Name | LOC130986986 |
| 原始查询 | SmilChr01G002799 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | serine/arginine repetitive matrix protein [Source:NCBI gene (formerly Entrezgene);Acc:829101]; symbol=AT4G29790; hit=AT4G29790; species=arabidopsis; confidence=medium |
| 产物 | serine/arginine repetitive matrix protein [Source:NCBI gene (formerly Entrezgene);Acc:829101]; symbol=AT4G29790; hit=AT4G29790; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G29790 (AT4G29790)serine/arginine repetitive matrix protein [Source:NCBI gene (formerly Entrezgene);Acc:829101] identity=44.9; qcov=1.02; evalue=0; confidence=medium |
| Rice | Os05g0350700- identity=34.3; qcov=1.05; evalue=3.76e-169; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130986986 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057766519.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057766519.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057766519.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057766519.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057766519.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:46481144 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr1:46481354 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B130 |
Chr1:46481395 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B114,B133 |
Chr1:46482163 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:46482170 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C12 |
Chr1:46482185 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:46483083 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A16 |
Chr1:46483099 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C58,C82 |
Chr1:46484144 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C11,C69 |
Chr1:46484226 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B68 |
Chr1:46484232 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B129 |
Chr1:46484557 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B105,B75 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
7 records
下载 cDNA FASTA7 records
下载 CDS FASTA7 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。