当前解析结果
SmilChr01G002814| 统一新 Gene ID | SmilChr01G002814 |
|---|---|
| 名称 | SmilChr01G002814 |
| 描述 | uncharacterized SmilChr01G002814 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 46696603 - 46697667 / + |
| NCBI Gene ID | LOC131008942 |
|---|---|
| GeneID | 131008942 |
| locus_tag | - |
| NCBI Name | LOC131008942 |
| 原始查询 | SmilChr01G002814 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os06g0521000; species=rice; confidence=low |
| 产物 | hit=Os06g0521000; species=rice; confidence=low |
| Arabidopsis | AT1G66235 (AT1G66235)no-apical-meristem-associated carboxy-terminal domain protein [Source:NCBI gene (formerly Entrezgene);Acc:842939] identity=27.6; qcov=0.739; evalue=5.37e-10; confidence=low |
| Rice | Os06g0521000- identity=33.3; qcov=0.745; evalue=6.85e-18; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008942 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057792056.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057792056.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057792056.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057792056.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057792056.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:46696618 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C62,D7 |
Chr1:46696642 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C1,C16 |
Chr1:46696670 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B129,C69 |
Chr1:46696671 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr1:46696682 |
G |
A |
EMS_canonical_SNV | stop_gained | 4 | A13,B107,B67,B86 |
Chr1:46696682 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A13,B107,B67,B86 |
Chr1:46696696 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B37,B54,B74 |
Chr1:46696697 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr1:46696698 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr1:46696719 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B74 |
Chr1:46696720 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A5 |
Chr1:46696770 |
GGT |
G |
2bp_deletion | frameshift_variant | 8 | A21,A4,B111,B51,B55,B57,B58,C23 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。