当前解析结果
SmilChr01G003071| 统一新 Gene ID | SmilChr01G003071 |
|---|---|
| 名称 | SmilChr01G003071 |
| 描述 | ALBINO3-like protein 2, chloroplastic |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 49553057 - 49558786 / - |
| NCBI Gene ID | LOC130989754 |
|---|---|
| GeneID | 130989754 |
| locus_tag | - |
| NCBI Name | LOC130989754 |
| 原始查询 | SmilChr01G003071 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | ALBINO3-like protein 2, chloroplastic |
| 产物 | ALBINO3-like protein 2%2C chloroplastic |
| Arabidopsis | AT3G44370 (AT3G44370)Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:823562] identity=47; qcov=0.871; evalue=4.33e-134; confidence=high |
| Rice | Os10g0521300- identity=27.1; qcov=0.47; evalue=5.77e-16; confidence=low |
| GO | GO:0005515 (protein binding); GO:0005743 (mitochondrial inner membrane); GO:0032977 (membrane insertase activity); GO:0032979 (protein insertion into mitochondrial inner membrane from matrix); GO:0033617 (mitochondrial respiratory chain complex IV assembly) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989754 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057769834.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 0.80000 | XP_057769843.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 0.60000 | XP_057769843.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057769834.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057769834.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:49553310 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:49553363 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B101 |
Chr1:49553573 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:49553873 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C77 |
Chr1:49555543 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C51 |
Chr1:49555761 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C22,C5 |
Chr1:49556826 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr1:49558416 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:49558421 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr1:49558556 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C33 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。