当前解析结果
SmilChr01G003131| 统一新 Gene ID | SmilChr01G003131 |
|---|---|
| 名称 | SmilChr01G003131 |
| 描述 | uncharacterized protein C23H3.12c |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 50137159 - 50141307 / - |
| NCBI Gene ID | LOC130990221 |
|---|---|
| GeneID | 130990221 |
| locus_tag | - |
| NCBI Name | LOC130990221 |
| 原始查询 | SmilChr01G003131 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | K+-H+ exchange-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841813]; symbol=AT1G53760; hit=AT1G53760; species=arabidopsis; confidence=high |
| 产物 | K+-H+ exchange-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841813]; symbol=AT1G53760; hit=AT1G53760; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G53760 (AT1G53760)K+-H+ exchange-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841813] identity=54.4; qcov=1; evalue=2.17e-104; confidence=high |
| Rice | Os02g0152600- identity=48.2; qcov=1.03; evalue=4.27e-89; confidence=high |
| GO | GO:0005743 (mitochondrial inner membrane); GO:0006813 (potassium ion transport); GO:1902600 (proton transmembrane transport) |
| KEGG | - |
| Pfam | PF10173 (Mit_KHE1) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990221 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057770434.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057770434.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 0.80000 | XP_057770434.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057770434.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057770434.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:50137457 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C77 |
Chr1:50137469 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B36 |
Chr1:50137541 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:50137764 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C27 |
Chr1:50137808 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr1:50137817 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr1:50140828 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057770434.1PF10173
Mit_KHE1 4-192 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057770434.1 |
Pfam | PF10173 |
Mit_KHE1 | Family | 4 | 192 | 1.5e-43 | 149.9 | Mitochondrial K+-H+ exchange-related |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。