Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G003254`

染色体: Chr01 坐标: 51244187-51246877 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G003254`
名称	SmilChr01G003254
描述	beta-fructofuranosidase, insoluble isoenzyme CWINV1-like
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	51244187 - 51246877 / `-`

ID 对照

NCBI Gene ID	`LOC130991362`
GeneID	`130991362`
locus_tag	`-`
NCBI Name	`LOC130991362`
原始查询	`SmilChr01G003254`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	beta-fructofuranosidase, insoluble isoenzyme CWINV1-like
产物	beta-fructofuranosidase%2C insoluble isoenzyme CWINV1-like
Arabidopsis	`AT3G13790` (ATBFRUCT1) Glycosyl hydrolases family 32 protein [Source:NCBI gene (formerly Entrezgene);Acc:820591] identity=62.1; qcov=0.962; evalue=0; confidence=high
Rice	`Os04g0413500` (GIF1) - identity=54.6; qcov=0.978; evalue=0; confidence=high
GO	GO:0004553 (hydrolase activity, hydrolyzing O-glycosyl compounds); GO:0005975 (carbohydrate metabolic process)
KEGG	smil00052 (Galactose metabolism - Salvia miltiorrhiza (redroot sage)); smil00500 (Starch and sucrose metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage))
Pfam	PF00251 (Glyco_hydro_32N); PF08244 (Glyco_hydro_32C)
InterPro	-
eggNOG	-
NR	GeneID:130991362

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Vacuole	液泡	0.80000	`XP_057771517.1`
2	Cell wall	细胞壁	0.20000	`XP_057771517.1`
3	Nucleus	细胞核	0.00000	`XP_057771517.1`
4	Chromosome	染色体	0.00000	`XP_057771517.1`
5	Centromere	着丝粒	0.00000	`XP_057771517.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:51244421`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr1:51244445`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B121,C3
`Chr1:51244477`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr1:51244814`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr1:51244915`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C56
`Chr1:51245254`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C2
`Chr1:51245338`	`G`	`A`	EMS_canonical_SNV	stop_gained	1	B69
`Chr1:51245338`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B69
`Chr1:51245723`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D4
`Chr1:51245766`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C3
`Chr1:51245824`	`TG`	`T`	1bp_deletion	frameshift_variant	2	A18,B103
`Chr1:51245824`	`TG`	`T`	1bp_deletion	CDS_variant	2	A18,B103

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057771517.1

593 aa

296

593

Glyco_hydro_32N

Glyco_hydro_32C

PF00251 Glyco_hydro_32N 82-391 aa PF08244 Glyco_hydro_32C 394-586 aa

XP_057771525.1

556 aa

278

556

Glyco_hydro_32N

Glyco_hydro_32C

PF00251 Glyco_hydro_32N 38-354 aa PF08244 Glyco_hydro_32C 357-549 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057771517.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	82	391	4.3e-95	319.5	Glycosyl hydrolases family 32 N-terminal domain
`XP_057771517.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	394	586	5.7e-27	95.4	Glycosyl hydrolases family 32 C terminal
`XP_057771525.1`	Pfam	`PF00251`	Glyco_hydro_32N	Repeat	38	354	1.4e-96	324.4	Glycosyl hydrolases family 32 N-terminal domain
`XP_057771525.1`	Pfam	`PF08244`	Glyco_hydro_32C	Domain	357	549	5e-27	95.6	Glycosyl hydrolases family 32 C terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057915542.1
GAATTGTCAATACATGAATAAGTCAACAAACTAAGGAGGAAGACAAGAATGAAAACAACTCAAACCAACCAAAATAATTCTCTACTCATTAAGCCTTTTTTTCTCGAGTCTGTTTGAAAAAATGATACTAATATTCCAACTTATATATGTGTGCATTAGACATTATGTAAGTAATAATAGGAAACAATGTGGTTGACCTTGACCCCTTAACTTGAGGTGACCATTACAAGTCATGAAGCTTGCATCTACACACACACACA...

XM_057915534.1
GAATTGTCAATACATGAATAAGTCAACAAACTAAGGAGGAAGACAAGAATGAAAACAACTCAAACCAACCAAAATAATTCTCTACTCATTAAGCCTTTTTTTCTCGAGTCTGTTTGAAAAAATGATACTAATATTCCAACTTATATATGTGTGCATTAGACATTATGTAAGTAATAATAGGAAACAATGTGGTTGACCTTGACCCCTTAACTTGAGGTGACCATTACAAGTCATGAAGCTTGCATCTACACACACACACA...

CDS

2 records

下载 CDS FASTA

LOC130991362
ATGGCATATTATCTGAATTATTGGTTGATAATTTGCTTCATATCACTTCTTGAAATTCAATCTTGTCTTAGTAGCATTCAAAGAGATGATCAGCCATACAGAACTGCATATCACTTCCAACCTCCCAAGAATTGGATGAATGGTCCAATGATATACAAAGGAATCTACCATTTATTCTACCAATACAACCCCAAAGGAGCAGTGTGGGGAAACATAGTTTGGGCACATTCCACATCAAGGGATCTCATCAACTGGACTCC...

LOC130991362
ATGGCATATTATCTGAATTATTGGTTGATAATTTGCTTCATATCACTTCTTGAAATTCAATCTTGTCTTAGTAGCATTCAAAGAGATGATCAGCCATACAGAACTGCATATCACTTCCAACCTCCCAAGAATTGGATGAATGGTAACAAACTCTTACGATCACACCACTTTTCTTCATGTTTCTTTAATCTTTGGCTAATCTTCATCTTCTTTTTTGGACATGGGACAACTTTGGAATCTCAAGATCCTAATGGTCCAAT...

Protein

2 records

下载 Protein FASTA

XP_057771517.1
MAYYLNYWLIICFISLLEIQSCLSSIQRDDQPYRTAYHFQPPKNWMNGNKLLRSHHFSSCFFNLWLIFIFFFGHGTTLESQDPNGPMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSRDLINWTPHPTAISPTIPSDIKGCWSGSATILSKGKPVILYTGINSQNQQEQNVAIPKNLSDPNLIEWIKPSYNPVMAPTQQNMINASSFRDPTTAWLGRDGRWRLIVGNKVGRRGRALMFRSRDFVLWTQAKHPLYSRRGTGM...

XP_057771525.1
MAYYLNYWLIICFISLLEIQSCLSSIQRDDQPYRTAYHFQPPKNWMNGPMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSRDLINWTPHPTAISPTIPSDIKGCWSGSATILSKGKPVILYTGINSQNQQEQNVAIPKNLSDPNLIEWIKPSYNPVMAPTQQNMINASSFRDPTTAWLGRDGRWRLIVGNKVGRRGRALMFRSRDFVLWTQAKHPLYSRRGTGMWECPDFYPVLTRGEDGVDTSTVGRGVKHVLKASMNDG...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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