当前解析结果
SmilChr01G003267| 统一新 Gene ID | SmilChr01G003267 |
|---|---|
| 名称 | SmilChr01G003267 |
| 描述 | glycine-rich cell wall structural protein 1.8-like |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 51346818 - 51353740 / + |
| NCBI Gene ID | LOC131009650 |
|---|---|
| GeneID | 131009650 |
| locus_tag | - |
| NCBI Name | LOC131009650 |
| 原始查询 | SmilChr01G003267 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glycine-rich cell wall structural protein 1.8-like |
| 产物 | glycine-rich cell wall structural protein 1.8-like |
| Arabidopsis | AT3G22125 (AT3G22125)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:28719301] identity=44; qcov=0.611; evalue=6.97e-12; confidence=low |
| Rice | Os03g0601000- identity=24.2; qcov=0.535; evalue=4.77e-09; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009650 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057793047.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057793047.1 |
| 3 | Cytosol | 细胞质基质 | 0.40000 | XP_057793047.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057793047.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057793047.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:51346913 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B82,C24,C87 |
Chr1:51346966 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B1,B126 |
Chr1:51346967 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A8,A9,B26 |
Chr1:51346970 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A8,A9,B26 |
Chr1:51346974 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | A8,A9,B26 |
Chr1:51346974 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A8,A9,B26 |
Chr1:51346999 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B136,B18,B48 |
Chr1:51347015 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A21,B101 |
Chr1:51347030 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B112,B25,C41 |
Chr1:51347033 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A21,B101 |
Chr1:51347035 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A9,B71 |
Chr1:51347038 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A21,B101 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。