当前解析结果
SmilChr01G003280| 统一新 Gene ID | SmilChr01G003280 |
|---|---|
| 名称 | SmilChr01G003280 |
| 描述 | uncharacterized SmilChr01G003280 |
| 染色体 / SeqID | Chr01 / NC_080387.1 |
| 坐标与链方向 | 51492295 - 51495595 / + |
| NCBI Gene ID | LOC130991561 |
|---|---|
| GeneID | 130991561 |
| locus_tag | - |
| NCBI Name | LOC130991561 |
| 原始查询 | SmilChr01G003280 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | WAS/WASL-interacting family protein [Source:NCBI gene (formerly Entrezgene);Acc:841959]; symbol=AT1G55160; hit=AT1G55160; species=arabidopsis; confidence=medium |
| 产物 | WAS/WASL-interacting family protein [Source:NCBI gene (formerly Entrezgene);Acc:841959]; symbol=AT1G55160; hit=AT1G55160; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G55160 (AT1G55160)WAS/WASL-interacting family protein [Source:NCBI gene (formerly Entrezgene);Acc:841959] identity=40.3; qcov=1.14; evalue=6.33e-32; confidence=medium |
| Rice | Os05g0593200- identity=42.1; qcov=0.672; evalue=5.41e-21; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991561 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057771834.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057771834.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 0.40000 | XP_057771834.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057771834.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057771834.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr1:51495128 |
CCA |
C |
2bp_deletion | frameshift_variant | 39 | A11,A13,A14,A2,A7,B104,B105,B107,B108,B109,B11,B111,B118,B122,B129,B134,B139,B18,B37,B44,B50,B53,B62,B64,B66,B76,C16,C20,C23,C24,C39,C42,C54,C57,C60,C62,C63,C82,C85 |
Chr1:51495261 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C52 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。