Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr01G003434`

染色体: Chr01 坐标: 52965291-52968974 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr01G003434`
名称	SmilChr01G003434
描述	uncharacterized SmilChr01G003434
染色体 / SeqID	Chr01 / NC_080387.1
坐标与链方向	52965291 - 52968974 / `-`

ID 对照

NCBI Gene ID	`LOC130992262`
GeneID	`130992262`
locus_tag	`-`
NCBI Name	`LOC130992262`
原始查询	`SmilChr01G003434`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434]; symbol=AT1G51172; hit=AT1G51172; species=arabidopsis; confidence=low
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434]; symbol=AT1G51172; hit=AT1G51172; species=arabidopsis; confidence=low
Arabidopsis	`AT1G51172` (AT1G51172) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:3767434] identity=29.1; qcov=0.356; evalue=1.03e-15; confidence=low
Rice	`Os02g0307900` - identity=31.5; qcov=0.187; evalue=5.26e-13; confidence=weak
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130992262

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057772803.1`
2	Nucleoplasm	核质	0.40000	`XP_057772811.1`
3	Chromosome	染色体	0.00000	`XP_057772803.1`
4	Centromere	着丝粒	0.00000	`XP_057772803.1`
5	Chromatin	染色质	0.00000	`XP_057772803.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr1:52965657`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A14,A24,B50
`Chr1:52965708`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B29,C41
`Chr1:52965713`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B4,C28,C59
`Chr1:52965750`	`C`	`T`	EMS_canonical_SNV	stop_gained	4	B105,C43,C53,C67
`Chr1:52965750`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B105,C43,C53,C67
`Chr1:52965752`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B133,B50,D3
`Chr1:52965845`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B15
`Chr1:52965863`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B42,B43
`Chr1:52965868`	`G`	`A`	EMS_canonical_SNV	stop_gained	13	B110,B15,B25,B26,B64,B95,C10,C21,C32,C39,C68,D2,D9
`Chr1:52965946`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B64,C22,C31,C58,D3
`Chr1:52965956`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	C2,C31,C72
`Chr1:52965984`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C15,C2

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057916820.1
ACATGGGCATTAGAGCTTGACAAAAGCCAAATGAGAATTATATTCTCGTCGAGAAGTGAAGCAGCAGGGTGATGGGGTCGATAAGGTCGATATGGCCATCAACTTTTTACTGCTTTGTTCTTTTTATTGTTATTTGCGAATGGATCGTACTATGTGAATTAAATAGGCTACTAGATGTTAGCCATTTGTCAGATATCTACTTTTTTTTTATTTTCTATAAGAAAGGGGAGCATGTTCCCCATTTTTCCCACACAAAATTT...

XM_057916828.1
ACATGGGCATTAGAGCTTGACAAAAGCCAAATGAGAATTATATTCTCGTCGAGAAGTGAAGCAGCAGGGTGATGGGGTCGATAAGGTCGATATGGCCATCAACTTTTTACTGCTTTGTTCTTTTTATTGTTATTTGCGAATGGATCGTACTATGTGAATTAAATAGGCTACTAGATGTTAGCCATTTGTCAGATATCTACTTTTTTTTTATTTTCTATAAGAAAGGGGAGCATGTTCCCCATTTTTCCCACACAAAATTT...

CDS

2 records

下载 CDS FASTA

LOC130992262
ATGGCCTTCATCCTTGCTACTTTAGGGGCTTTGATTATTATGTCACGTGCACGAGAAGGATCAATCGGGTCGTCAAGTAGGACTCGACATTCGGTTGATGAGGATGAGGATAACGTGTTAGACATTCCTACTGGAGTGGAGATCGGGGCTTGGCGAGGTGAATCGGGTGATTCATCTCAAGATATGGGCTTAGGGATTAATAGTGCTGACGGACTTTACGGGGTTAAGGTTAATGAGACATTTTTGTTGGGTAAGAACCA...

Protein

2 records

下载 Protein FASTA

XP_057772803.1
MAFILATLGALIIMSRAREGSIGSSSRTRHSVDEDEDNVLDIPTGVEIGAWRGESGDSSQDMGLGINSADGLYGVKVNETFLLGKNHPSKFTNINQMYNLRILYNIPKWVSLHAPGTALRADHSVAGWVCMYEKTFKEGLRLPLPRLVLEFLHYYHISPGQLMPNVWRVLMGMQAFGELKGFEVDLEDVLSTYTVQENNTERGRYQLSRGKKLPELVCGVTDSGSAWKHKYFFMNYDALGDLTGYDIPSAWCNARRLTVP...

XP_057772811.1
MAFILATLGALIIMSRAREGSIGSSSRTRHSVDEDEDNVLDIPTGVEIGAWRGESGDSSQDMGLGINSADGLYGVKVNETFLLGKNHPSKFTNINQMYNLRILYNIPKWVSLHAPGTALRADHSVAGWVCMYEKTFKEGLRLPLPRLVLEFLHYYHISPGQLMPNVWRVLMGMQAFGELKGFEVDLEDVLSTYTVQENNTERGRYQLSRGKKLPELVCGVTDSGSAWKHKYFFMNYDALGDLTGYDIPSAWCNARRLTVP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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